C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002EB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043593-ENSDARG00000009681 CGP 7955 8:12292777-12505597
GeneTranscriptPositionBiotype
ENSDARG00000009681 (med27)
mediator complex subunit 27
ENSDART00000005140 (med27-001) 12402203-12505597 protein_coding
ENSDART00000138111 (med27-002) 12472648-12502841 retained_intron
ENSDARG00000043593 (rapgef1a)
Rap guanine nucleotide exchange factor (GEF) 1a
ENSDART00000064017 (rapgef1a-201) 12292777-12361745 protein_coding
ENSDART00000139947 (rapgef1a-001) 12297079-12350305 protein_coding
CIL_0002EB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107263-ENSG00000160563 CGP 9606 9:131576770-132079908
GeneTranscriptPositionBiotype
ENSG00000160563 (MED27)
mediator complex subunit 27
ENST00000292035 (MED27-001) 131860107-132079908 protein_coding
ENST00000357028 (MED27-002) 131860107-132079866 protein_coding
ENST00000444872 (MED27-004) 132031886-132079645 processed_transcript
ENST00000474263 (MED27-003) 132073351-132079866 protein_coding
ENSG00000231018 (EIF4A1P3)
eukaryotic translation initiation factor 4A1 pseudogene 3
ENST00000411521 (EIF4A1P3-001) 131782570-131782813 processed_pseudogene
ENSG00000236687 (RP11-323H21.3)
ENST00000444708 (RP11-323H21.3-001) 131816192-131820988 lincRNA
ENSG00000240853 (RN7SL328P)
RNA, 7SL, cytoplasmic 328, pseudogene
ENST00000484033 (RN7SL328P-201) 131725168-131725467 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EB_0001ENSDARG00000009681ENSDART00000005140ENSDART00000138111ENSDARG00000043593ENSDART00000064017ENSDART00000139947CIL_0002EB_0002ENSG00000160563ENST00000292035ENST00000357028ENST00000444872ENST00000474263ENSG00000231018ENST00000411521ENSG00000236687ENST00000444708ENSG00000240853ENST00000484033
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EB_0001ENSDARG00000009681ENSDART00000005140ENSDART00000138111ENSDARG00000043593ENSDART00000064017ENSDART00000139947CIL_0002EB_0002ENSG00000160563ENST00000292035ENST00000357028ENST00000444872ENST00000474263ENSG00000231018ENST00000411521ENSG00000236687ENST00000444708ENSG00000240853ENST00000484033
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009681 ENSDART00000005140 N/A N/A N/A 6.306±4.52 N/A N/A 4.196±2.88 9.773±7.34 0.380±0.00 N/A 2.300±0.00 N/A N/A N/A
ENSDART00000138111 N/A N/A N/A N/A N/A N/A 6.209±0.99 4.173±1.40 N/A N/A N/A N/A N/A N/A
ENSDARG00000043593 ENSDART00000064017 N/A N/A N/A 3.245±1.89 N/A N/A 0.924±0.42 1.240±0.22 0.102±0.00 N/A 0.677±0.00 N/A N/A N/A
ENSDART00000139947 N/A N/A N/A N/A N/A N/A 0.717±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160563 ENST00000292035 5.681±0.00 9.108±0.00 N/A 5.014±2.23 2.916±1.44 2.336±2.06 2.627±2.24 3.569±2.51 2.242±0.69 2.982±1.56 3.506±3.28 11.379±7.71 17.704±6.97 21.278±11.93
ENST00000357028 N/A N/A N/A 1.133±0.00 N/A 0.652±0.00 N/A N/A N/A 2.434±0.00 N/A N/A N/A 3.977±0.00
ENST00000444872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.814±0.00 N/A N/A N/A
ENST00000474263 N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A 1.040±0.00 N/A 2.399±0.00 N/A N/A
ENSG00000231018 ENST00000411521 0.062±0.00 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A 0.960±0.00 N/A 0.058±0.00
ENSG00000236687 ENST00000444708 0.094±0.00 0.191±0.00 N/A 0.021±0.00 N/A 0.036±0.00 0.018±0.00 0.058±0.00 N/A 0.035±0.00 N/A N/A N/A 0.222±0.10
ENSG00000240853 ENST00000484033 N/A 0.977±0.00 0.317±0.00 0.067±0.00 1.883±0.00 N/A 0.116±0.00 N/A N/A 6.025±0.00 N/A 0.289±0.00 0.264±0.00 0.142±0.00

Loading