C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rap guanine nucleotide exchange factor (GEF) 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000139947 rapgef1a-001 ENSDARG00000043593 7955 - 8:12297079-12350305 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSDART00000139947
Transcript ID Heart
ENSDART00000139947 0.717±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EB CIL_0002EB_0001 CGP 8:12292777-12505597

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091146 Rapgef1-004 protein_coding Mus_musculus 1e-19 104
ENSMUST00000095087 Rapgef1-007 protein_coding Mus_musculus 0.00000000000001 88
ENSMUST00000102872 Rapgef1-001 protein_coding Mus_musculus 0.00000000000001 88
ENSMUST00000147755 Rapgef1-003 nonsense_mediated_decay Mus_musculus 7e-20 104

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