C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138274 St3gal3-004 ENSMUSG00000028538 10090 - 4:117940354-118031882 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000138274
Transcript ID Testis
ENSMUST00000138274 0.443±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599
CIL_0002F2 CIL_0002F2_0002 CGP 4:117932154-118180043

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262915 ST3GAL3-201 protein_coding Homo_sapiens 0 756
ENST00000332628 ST3GAL3-033 protein_coding Homo_sapiens 0 640
ENST00000335430 ST3GAL3-203 protein_coding Homo_sapiens 0 580
ENST00000347631 ST3GAL3-006 protein_coding Homo_sapiens 0 819
ENST00000351035 ST3GAL3-204 protein_coding Homo_sapiens 0 756
ENST00000353126 ST3GAL3-205 protein_coding Homo_sapiens 0 821
ENST00000361392 ST3GAL3-001 protein_coding Homo_sapiens 0 819
ENST00000361400 ST3GAL3-002 protein_coding Homo_sapiens 0 819
ENST00000361746 ST3GAL3-004 protein_coding Homo_sapiens 0 756
ENST00000361812 ST3GAL3-007 protein_coding Homo_sapiens 0 339
ENST00000372362 ST3GAL3-012 protein_coding Homo_sapiens 0 339
ENST00000372365 ST3GAL3-009 protein_coding Homo_sapiens 0 580
ENST00000372366 ST3GAL3-008 protein_coding Homo_sapiens 0 580
ENST00000372367 ST3GAL3-005 protein_coding Homo_sapiens 0 580
ENST00000372368 ST3GAL3-010 protein_coding Homo_sapiens 0 756
ENST00000372369 ST3GAL3-003 protein_coding Homo_sapiens 0 819
ENST00000372372 ST3GAL3-011 protein_coding Homo_sapiens 0 756
ENST00000372374 ST3GAL3-206 protein_coding Homo_sapiens 0 640
ENST00000461375 ST3GAL3-022 processed_transcript Homo_sapiens 0 1061
ENST00000469715 ST3GAL3-018 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000489897 ST3GAL3-016 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000490541 ST3GAL3-013 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000528371 ST3GAL3-025 protein_coding Homo_sapiens 0 580
ENST00000530154 ST3GAL3-032 nonsense_mediated_decay Homo_sapiens 0 747
ENST00000530581 ST3GAL3-031 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000531451 ST3GAL3-017 protein_coding Homo_sapiens 0 339
ENST00000531993 ST3GAL3-026 protein_coding Homo_sapiens 0 821
ENST00000533212 ST3GAL3-030 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000533933 ST3GAL3-027 protein_coding Homo_sapiens 0 821
ENST00000533997 ST3GAL3-028 nonsense_mediated_decay Homo_sapiens 0 645
ENST00000545417 ST3GAL3-207 protein_coding Homo_sapiens 0 339

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