C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002F7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152749-ENSG00000125285 CGP 9606 13:94601903-94712399
GeneTranscriptPositionBiotype
ENSG00000125285 (SOX21)
SRY (sex determining region Y)-box 21 		ENST00000376945 (SOX21-001) 94709622-94712399 protein_coding
ENSG00000152749 (GPR180)
G protein-coupled receptor 180 		ENST00000376958 (GPR180-001) 94601903-94634645 protein_coding
ENSG00000222129 (RNA5SP36)
RNA, 5S ribosomal pseudogene 36 		ENST00000410197 (RNA5SP36-201) 94651397-94651529 rRNA
ENSG00000238230 (LINC00391)
long intergenic non-protein coding RNA 391 		ENST00000433569 (LINC00391-001) 94699694-94702862 lincRNA
ENSG00000274168 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000470538 (Metazoa_SRP.1-270) 94699223-94699502 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002F7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022131-ENSMUSG00000061517 CGP 10090 14:118137127-118237030
GeneTranscriptPositionBiotype
ENSMUSG00000022131 (Gpr180)
G protein-coupled receptor 180 		ENSMUST00000022728 (Gpr180-201) 118137127-118164232 protein_coding
ENSMUSG00000061517 (Sox21)
SRY (sex determining region Y)-box 21 		ENSMUST00000170662 (Sox21-001) 118233232-118237030 protein_coding
ENSMUSG00000090534 (Gm4675)
predicted gene 4675 		ENSMUST00000163396 (Gm4675-002) 118236880-118261199 processed_transcript
ENSMUST00000164755 (Gm4675-001) 118236232-118238759 processed_transcript
ENSMUST00000169262 (Gm4675-003) 118253716-118254258 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F7_0001ENSG00000125285ENST00000376945ENSG00000152749ENST00000376958ENSG00000222129ENST00000410197ENSG00000238230ENST00000433569ENSG00000274168ENST00000470538CIL_0002F7_0002ENSMUSG00000022131ENSMUST00000022728ENSMUSG00000061517ENSMUST00000170662ENSMUSG00000090534ENSMUST00000163396ENSMUST00000164755ENSMUST00000169262
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F7_0001ENSG00000125285ENST00000376945ENSG00000152749ENST00000376958ENSG00000222129ENST00000410197ENSG00000238230ENST00000433569ENSG00000274168ENST00000470538CIL_0002F7_0002ENSMUSG00000022131ENSMUST00000022728ENSMUSG00000061517ENSMUST00000170662ENSMUSG00000090534ENSMUST00000163396ENSMUST00000164755
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125285 ENST00000376945 N/A N/A N/A 0.740±0.17 N/A N/A N/A N/A N/A 0.130±0.06 N/A 0.205±0.05 N/A 0.142±0.12
ENSG00000152749 ENST00000376958 2.074±0.00 1.052±0.00 0.771±0.00 1.365±0.61 2.369±0.77 0.947±0.12 0.681±0.05 1.036±0.00 1.677±0.00 1.205±0.70 0.471±0.33 1.733±0.96 0.786±0.17 0.731±0.30
ENSG00000222129 ENST00000410197 N/A N/A N/A N/A N/A N/A N/A 9.509±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000238230 ENST00000433569 N/A N/A N/A 0.122±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274168 ENST00000470538 0.167±0.00 N/A N/A 0.304±0.18 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022131 ENSMUST00000022728 12.696±1.24 27.223±4.93 4.129±1.49 2.162±0.80 10.417±1.83 15.316±2.58 5.925±0.63 10.422±2.25 7.602±5.34 10.716±2.02 4.691±1.99 19.330±9.95 8.043±1.45 4.981±1.33
ENSMUSG00000061517 ENSMUST00000170662 N/A 0.047±0.05 0.035±0.01 6.791±3.95 0.072±0.05 0.980±0.10 0.075±0.00 0.008±0.00 0.008±0.00 0.389±0.12 0.028±0.01 0.153±0.05 0.583±0.53 0.014±0.01
ENSMUSG00000090534 ENSMUST00000163396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A 0.107±0.00
ENSMUST00000164755 N/A 0.093±0.04 0.010±0.00 2.662±0.66 0.121±0.05 1.017±0.21 0.056±0.01 N/A 0.009±0.00 0.291±0.06 0.023±0.00 0.154±0.09 0.055±0.04 N/A
ENSMUST00000169262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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