C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002GM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104522-ENSG00000183309 CGP 9606 8:143612618-143656418
GeneTranscriptPositionBiotype
ENSG00000104522 (TSTA3)
tissue specific transplantation antigen P35B 		ENST00000425753 (TSTA3-001) 143612618-143617566 protein_coding
ENST00000524719 (TSTA3-016) 143612618-143613607 protein_coding
ENST00000525274 (TSTA3-014) 143614405-143616726 retained_intron
ENST00000526290 (TSTA3-005) 143614821-143618048 protein_coding
ENST00000527006 (TSTA3-012) 143614863-143616464 protein_coding
ENST00000527549 (TSTA3-013) 143614647-143617507 retained_intron
ENST00000527677 (TSTA3-017) 143612621-143613391 retained_intron
ENST00000528920 (TSTA3-015) 143612618-143614385 retained_intron
ENST00000529048 (TSTA3-009) 143613529-143617474 protein_coding
ENST00000529064 (TSTA3-004) 143612618-143617482 protein_coding
ENST00000529899 (TSTA3-007) 143615886-143617549 retained_intron
ENST00000530474 (TSTA3-011) 143614364-143617511 nonsense_mediated_decay
ENST00000531006 (TSTA3-006) 143615943-143617552 retained_intron
ENST00000531473 (TSTA3-003) 143612618-143617504 retained_intron
ENST00000532308 (TSTA3-008) 143613770-143617532 retained_intron
ENST00000533817 (TSTA3-010) 143614322-143617300 protein_coding
ENSG00000183309 (ZNF623)
zinc finger protein 623 		ENST00000458270 (ZNF623-002) 143636162-143652376 protein_coding
ENST00000501748 (ZNF623-001) 143649660-143656418 protein_coding
ENST00000526926 (ZNF623-003) 143636013-143652376 protein_coding
ENSG00000254812 (RP11-661A12.12)
 ENST00000524808 (RP11-661A12.12-001) 143632071-143633756 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0002GM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022570-ENSMUSG00000050846 CGP 10090 15:75924684-75949377
GeneTranscriptPositionBiotype
ENSMUSG00000022570 (Tsta3)
tissue specific transplantation antigen P35B 		ENSMUST00000023231 (Tsta3-201) 75924684-75929730 protein_coding
ENSMUSG00000050846 (Zfp623)
zinc finger protein 623 		ENSMUST00000037260 (Zfp623-201) 75940952-75949377 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GM_0001ENSG00000104522ENST00000425753ENST00000524719ENST00000525274ENST00000526290ENST00000527006ENST00000527549ENST00000527677ENST00000528920ENST00000529048ENST00000529064ENST00000529899ENST00000530474ENST00000531006ENST00000531473ENST00000532308ENST00000533817ENSG00000183309ENST00000458270ENST00000501748ENST00000526926ENSG00000254812ENST00000524808CIL_0002GM_0002ENSMUSG00000022570ENSMUST00000023231ENSMUSG00000050846ENSMUST00000037260
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GM_0001ENSG00000104522ENST00000425753ENST00000525274ENST00000527549ENST00000529048ENST00000529064ENST00000530474ENST00000531473ENST00000532308ENSG00000183309ENST00000458270ENST00000501748ENST00000526926ENSG00000254812ENST00000524808CIL_0002GM_0002ENSMUSG00000022570ENSMUST00000023231ENSMUSG00000050846ENSMUST00000037260
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104522 ENST00000425753 19.219±0.00 39.114±0.00 N/A 4.950±3.12 18.469±0.00 8.824±7.32 9.578±0.00 30.193±0.00 30.968±29.35 22.345±0.00 20.520±0.00 40.424±24.10 37.664±8.85 43.302±3.22
ENST00000524719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.420±0.00 N/A N/A N/A
ENST00000526290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527549 N/A N/A 0.843±0.00 N/A N/A 1.989±0.00 0.644±0.00 N/A 1.321±0.00 2.253±0.00 N/A 7.837±0.00 N/A N/A
ENST00000527677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529048 N/A N/A 1.884±0.00 N/A N/A N/A N/A 6.043±0.00 N/A 0.639±0.00 N/A 30.281±0.00 13.076±0.00 24.132±0.00
ENST00000529064 5.672±0.00 N/A 1.252±0.00 3.178±0.00 8.846±0.00 N/A 0.615±0.00 1.446±0.00 N/A 1.448±0.00 N/A 6.343±4.09 9.084±0.00 N/A
ENST00000529899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530474 N/A N/A N/A 1.365±0.00 N/A 2.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531473 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A N/A N/A
ENST00000532308 N/A N/A N/A N/A N/A 6.083±0.00 N/A N/A 0.596±0.00 N/A N/A N/A N/A N/A
ENST00000533817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183309 ENST00000458270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.046±0.00
ENST00000501748 N/A N/A 0.293±0.00 0.387±0.00 0.435±0.00 0.900±0.67 0.099±0.00 0.391±0.00 N/A N/A N/A 1.168±0.60 N/A 2.189±0.00
ENST00000526926 1.118±0.00 N/A 0.905±0.00 1.576±0.00 2.915±0.00 1.949±0.59 0.731±0.00 0.298±0.00 1.400±0.00 1.673±0.76 2.152±0.00 2.660±0.87 1.220±0.11 2.311±0.55
ENSG00000254812 ENST00000524808 0.116±0.00 0.595±0.00 N/A 0.581±0.00 0.273±0.00 0.092±0.00 0.235±0.00 0.132±0.00 0.028±0.00 0.032±0.00 0.302±0.00 0.095±0.02 0.070±0.02 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022570 ENSMUST00000023231 14.898±1.74 8.659±4.71 15.135±0.44 17.360±10.25 15.937±3.01 101.213±12.47 2.728±0.58 11.801±3.82 12.709±4.67 12.556±3.03 6.824±2.56 11.560±5.08 18.376±10.35 35.468±16.41
ENSMUSG00000050846 ENSMUST00000037260 5.304±2.49 5.098±0.67 3.404±1.00 5.610±2.06 2.807±0.80 4.409±1.16 2.796±0.16 3.819±0.95 3.907±1.53 5.522±1.32 1.547±0.49 5.810±1.73 3.851±2.60 1.155±0.47

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