C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tissue specific transplantation antigen P35B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425753 TSTA3-001 ENSG00000104522 9606 - 8:143612618-143617566 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000425753
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000425753 19.219±0.00 39.114±0.00 4.950±3.12 18.469±0.00 8.824±7.32 9.578±0.00 30.193±0.00 30.968±29.35 22.345±0.00 20.520±0.00 40.424±24.10 37.664±8.85 43.302±3.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0002GN CIL_0002GN_0001 CGP 8:143603913-143618048
CIL_0002GM CIL_0002GM_0001 CGP 8:143612618-143656418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005737 IC cytoplasm
GO:0007159 NAS leukocyte cell-cell adhesion
GO:0008152 IEA metabolic process
GO:0009055 TAS electron carrier activity
GO:0016853 IEA isomerase activity
GO:0019673 IDA GDP-mannose metabolic process
GO:0019835 IEA cytolysis
GO:0042351 IEA 'de novo' GDP-L-fucose biosynthetic process
GO:0042356 TAS GDP-4-dehydro-D-rhamnose reductase activity
GO:0050577 IDA GDP-L-fucose synthase activity
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023231 Tsta3-201 protein_coding Mus_musculus 0 1155

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