C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tissue specific transplantation antigen P35B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023231 Tsta3-201 ENSMUSG00000022570 10090 - 15:75924684-75929730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023231
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023231 14.898±1.74 8.659±4.71 15.135±0.44 17.360±10.25 15.937±3.01 101.213±12.47 2.728±0.58 11.801±3.82 12.709±4.67 12.556±3.03 6.824±2.56 11.560±5.08 18.376±10.35 35.468±16.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0002GN CIL_0002GN_0002 CGP 15:75916463-75929730
CIL_0002GM CIL_0002GM_0002 CGP 15:75924684-75949377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016853 IEA isomerase activity
GO:0019673 IEA GDP-mannose metabolic process
GO:0019835 IMP cytolysis
GO:0042351 IEA 'de novo' GDP-L-fucose biosynthetic process
GO:0050577 IEA GDP-L-fucose synthase activity
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000425753 TSTA3-001 protein_coding Homo_sapiens 0 1155
ENST00000528920 TSTA3-015 retained_intron Homo_sapiens 2.99878e-43 180
ENST00000529048 TSTA3-009 protein_coding Homo_sapiens 0 974
ENST00000529064 TSTA3-004 protein_coding Homo_sapiens 0 1155
ENST00000531473 TSTA3-003 retained_intron Homo_sapiens 0 630
ENST00000532308 TSTA3-008 retained_intron Homo_sapiens 0 318
ENST00000612580 TSTA3-201 protein_coding Homo_sapiens 0 1155

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