C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tissue specific transplantation antigen P35B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529064 TSTA3-004 ENSG00000104522 9606 - 8:143612618-143617482 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLungOvaryPlacentaENST00000529064
Transcript ID Adipose Bladder Brain Breast Heart Kidney Lung Ovary Placenta
ENST00000529064 5.672±0.00 1.252±0.00 3.178±0.00 8.846±0.00 0.615±0.00 1.446±0.00 1.448±0.00 6.343±4.09 9.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0002GN CIL_0002GN_0001 CGP 8:143603913-143618048
CIL_0002GM CIL_0002GM_0001 CGP 8:143612618-143656418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005737 IC cytoplasm
GO:0007159 NAS leukocyte cell-cell adhesion
GO:0008152 IEA metabolic process
GO:0009055 TAS electron carrier activity
GO:0016853 IEA isomerase activity
GO:0019673 IDA GDP-mannose metabolic process
GO:0042351 IEA 'de novo' GDP-L-fucose biosynthetic process
GO:0042356 TAS GDP-4-dehydro-D-rhamnose reductase activity
GO:0050577 IDA GDP-L-fucose synthase activity
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023231 Tsta3-201 protein_coding Mus_musculus 0 1155

Loading