C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002J6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165140-ENSG00000148120 CGP 9606 9:94603133-95087218
GeneTranscriptPositionBiotype
ENSG00000148120 (C9orf3)
chromosome 9 open reading frame 3 		ENST00000277198 (C9orf3-004) 94726701-94931833 protein_coding
ENST00000297979 (C9orf3-002) 94726712-95087159 protein_coding
ENST00000375315 (C9orf3-201) 94759649-95087218 protein_coding
ENST00000424143 (C9orf3-006) 94760315-95080894 protein_coding
ENST00000427193 (C9orf3-003) 94760162-94763411 protein_coding
ENST00000428313 (C9orf3-008) 94760438-95087159 protein_coding
ENST00000445181 (C9orf3-015) 95004996-95083035 protein_coding
ENST00000451893 (C9orf3-018) 94955946-95006200 protein_coding
ENST00000460573 (C9orf3-019) 94967784-95060919 processed_transcript
ENST00000462125 (C9orf3-011) 94921209-95080756 processed_transcript
ENST00000463372 (C9orf3-001) 95005097-95087052 processed_transcript
ENST00000468164 (C9orf3-007) 95056270-95086918 processed_transcript
ENST00000471978 (C9orf3-014) 95004980-95086731 processed_transcript
ENST00000473778 (C9orf3-009) 94921204-94933671 processed_transcript
ENST00000478473 (C9orf3-016) 95005008-95086841 nonsense_mediated_decay
ENST00000478603 (C9orf3-013) 95003917-95060987 processed_transcript
ENST00000479161 (C9orf3-010) 94921260-95082592 processed_transcript
ENST00000482056 (C9orf3-020) 95018891-95022285 processed_transcript
ENST00000488186 (C9orf3-012) 94920215-94935356 processed_transcript
ENST00000489318 (C9orf3-021) 94760306-94773255 processed_transcript
ENST00000489562 (C9orf3-005) 95048768-95082728 processed_transcript
ENST00000496567 (C9orf3-017) 95005013-95022277 processed_transcript
ENSG00000165140 (FBP1)
fructose-1,6-bisphosphatase 1 		ENST00000375326 (FBP1-001) 94603133-94639507 protein_coding
ENST00000414122 (FBP1-002) 94606815-94640137 protein_coding
ENST00000415431 (FBP1-201) 94603141-94640249 protein_coding
ENSG00000207864 (MIR27B)
microRNA 27b 		ENST00000385129 (MIR27B-201) 95085435-95085542 miRNA
ENSG00000224764 (RP11-54O15.3)
 ENST00000439872 (RP11-54O15.3-001) 94928551-94934946 antisense
ENSG00000230815 (RP11-49O14.3)
 ENST00000437846 (RP11-49O14.3-001) 94824272-94824773 sense_intronic
ENSG00000236095 (RP11-49O14.2)
 ENST00000416455 (RP11-49O14.2-001) 94900429-94904754 sense_intronic
ENSG00000252153 (MIR2278)
microRNA 2278 		ENST00000516344 (MIR2278-201) 94809962-94810057 miRNA
CIL_0002J6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069805-ENSMUSG00000021458 CGP 10090 13:62864753-63326096
GeneTranscriptPositionBiotype
ENSMUSG00000021458 (2010111I01Rik)
RIKEN cDNA 2010111I01 gene 		ENSMUST00000021911 (2010111I01Rik-201) 63015167-63302284 protein_coding
ENSMUST00000091560 (2010111I01Rik-202) 63014934-63299656 protein_coding
ENSMUST00000159152 (2010111I01Rik-002) 63282142-63326096 protein_coding
ENSMUSG00000065475 (Mir27b)
microRNA 27b 		ENSMUST00000083541 (Mir27b-201) 63300700-63300796 miRNA
ENSMUSG00000065599 (Mir23b)
microRNA 23b 		ENSMUST00000083665 (Mir23b-201) 63300472-63300568 miRNA
ENSMUSG00000069805 (Fbp1)
fructose bisphosphatase 1 		ENSMUST00000092888 (Fbp1-001) 62864753-62888282 protein_coding
ENSMUST00000134814 (Fbp1-002) 62872719-62888127 nonsense_mediated_decay
ENSMUST00000150013 (Fbp1-003) 62864766-62872758 protein_coding
ENSMUSG00000092741 (Mir3074-1)
microRNA 3074-1 		ENSMUST00000175000 (Mir3074-1-201) 63301180-63301296 miRNA
ENSMUSG00000097242 (Gm16907)
predicted gene, 16907 		ENSMUST00000180734 (Gm16907-201) 63289601-63297147 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002J6_0001ENSG00000148120ENST00000277198ENST00000297979ENST00000375315ENST00000424143ENST00000427193ENST00000428313ENST00000445181ENST00000451893ENST00000460573ENST00000462125ENST00000463372ENST00000468164ENST00000471978ENST00000473778ENST00000478473ENST00000478603ENST00000479161ENST00000482056ENST00000488186ENST00000489318ENST00000489562ENST00000496567ENSG00000165140ENST00000375326ENST00000414122ENST00000415431ENSG00000207864ENST00000385129ENSG00000224764ENST00000439872ENSG00000230815ENST00000437846ENSG00000236095ENST00000416455ENSG00000252153ENST00000516344CIL_0002J6_0002ENSMUSG00000021458ENSMUST00000021911ENSMUST00000091560ENSMUST00000159152ENSMUSG00000065475ENSMUST00000083541ENSMUSG00000065599ENSMUST00000083665ENSMUSG00000069805ENSMUST00000092888ENSMUST00000134814ENSMUST00000150013ENSMUSG00000092741ENSMUST00000175000ENSMUSG00000097242ENSMUST00000180734
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002J6_0001ENSG00000148120ENST00000277198ENST00000297979ENST00000375315ENST00000463372ENST00000471978ENST00000478603ENST00000482056ENST00000496567ENSG00000165140ENST00000375326ENST00000414122ENST00000415431ENSG00000207864ENST00000385129ENSG00000224764ENST00000439872ENSG00000230815ENST00000437846ENSG00000236095ENST00000416455ENSG00000252153ENST00000516344CIL_0002J6_0002ENSMUSG00000021458ENSMUST00000021911ENSMUST00000091560ENSMUSG00000065475ENSMUST00000083541ENSMUSG00000065599ENSMUST00000083665ENSMUSG00000069805ENSMUST00000092888ENSMUST00000134814ENSMUST00000150013ENSMUSG00000092741ENSMUST00000175000ENSMUSG00000097242ENSMUST00000180734
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148120 ENST00000277198 N/A N/A 3.814±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.984±0.00 N/A 2.631±0.00
ENST00000297979 N/A N/A N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A 1.856±0.00 3.420±1.25
ENST00000375315 N/A N/A N/A 1.276±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463372 4.281±0.00 N/A N/A 10.282±0.00 6.575±0.00 21.832±0.00 18.625±0.00 11.351±6.23 14.057±0.00 23.051±0.00 5.860±2.12 25.887±4.43 17.041±5.97 20.451±0.00
ENST00000468164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471978 N/A N/A N/A N/A N/A N/A 44.090±0.00 N/A N/A N/A N/A 75.661±0.00 16.403±0.00 N/A
ENST00000473778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478603 N/A N/A N/A N/A N/A N/A N/A 3.511±0.00 N/A N/A N/A N/A N/A N/A
ENST00000479161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482056 N/A N/A N/A N/A N/A N/A N/A 1.686±0.00 N/A 4.655±0.00 4.242±0.00 N/A N/A N/A
ENST00000488186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496567 N/A 3.626±0.00 5.296±0.00 2.463±0.00 2.283±0.00 3.906±0.00 N/A 3.903±0.72 2.336±0.00 8.160±0.00 1.327±0.00 N/A 4.760±1.04 N/A
ENSG00000165140 ENST00000375326 6.470±0.00 3.481±0.00 10.385±0.00 0.859±0.80 5.518±5.06 1.375±0.01 0.636±0.00 36.421±5.79 157.927±156.41 28.519±17.32 0.189±0.07 4.166±2.25 3.910±1.27 1.477±0.69
ENST00000414122 N/A N/A N/A N/A 0.942±0.00 0.969±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415431 N/A N/A N/A N/A N/A 0.248±0.00 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000207864 ENST00000385129 N/A N/A N/A N/A 0.430±0.00 N/A 0.590±0.00 N/A N/A N/A N/A N/A 2.092±0.00 N/A
ENSG00000224764 ENST00000439872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.555±0.00
ENSG00000230815 ENST00000437846 N/A N/A 2.034±0.00 0.059±0.00 1.700±0.00 0.104±0.00 0.315±0.00 N/A N/A N/A N/A 0.169±0.00 N/A 0.103±0.00
ENSG00000236095 ENST00000416455 0.069±0.00 N/A 0.080±0.00 0.109±0.00 N/A 0.036±0.00 0.048±0.01 N/A 0.231±0.02 0.065±0.00 N/A 0.225±0.23 0.084±0.00 0.337±0.00
ENSG00000252153 ENST00000516344 N/A 0.572±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021458 ENSMUST00000021911 N/A N/A N/A 4.230±0.00 N/A 11.040±0.00 5.218±1.72 7.347±2.39 1.927±0.47 12.905±0.00 3.034±0.36 4.010±0.00 2.641±0.50 3.203±0.97
ENSMUST00000091560 6.183±2.22 5.682±0.53 N/A 3.654±0.16 4.415±1.19 8.203±0.00 4.223±0.00 4.359±0.00 1.750±0.54 11.983±0.00 2.178±0.47 7.075±2.49 1.590±0.22 1.562±0.07
ENSMUST00000159152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065475 ENSMUST00000083541 N/A 5492.440±0.00 N/A N/A 8503.580±0.00 44261.801±0.00 N/A 4055.150±0.00 N/A N/A N/A 1803.745±1213.13 80.661±11.20 3120.990±0.00
ENSMUSG00000065599 ENSMUST00000083665 4180.540±0.00 N/A N/A N/A 4107.480±0.00 N/A N/A 3262.390±0.00 N/A N/A N/A N/A 92.228±0.00 N/A
ENSMUSG00000069805 ENSMUST00000092888 0.397±0.19 0.318±0.23 4.971±1.69 0.083±0.06 1.172±0.88 1.126±0.33 0.292±0.08 681.396±162.61 507.383±417.65 0.771±0.33 0.057±0.01 1.364±0.73 0.123±0.07 316.830±120.42
ENSMUST00000134814 N/A 0.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.246±0.02 N/A 20.294±0.00
ENSMUST00000150013 N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.07 0.610±0.18 0.163±0.00 N/A
ENSMUSG00000092741 ENSMUST00000175000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.992±0.97 1193.220±0.00
ENSMUSG00000097242 ENSMUST00000180734 N/A N/A N/A N/A 3.467±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.394±0.35

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