C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076521-ENSDARG00000027491 CGP 7955 12:50173493-50196421
GeneTranscriptPositionBiotype
ENSDARG00000027491 (uros)
uroporphyrinogen III synthase 		ENSDART00000105309 (uros-201) 50188051-50196421 protein_coding
ENSDART00000130190 (uros-202) 50188002-50196421 protein_coding
ENSDARG00000076521 (MMP21)
matrix metallopeptidase 21 		ENSDART00000114949 (MMP21-201) 50173493-50187857 protein_coding
CIL_0002JY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154485-ENSG00000188690 CGP 9606 10:125766453-125823248
GeneTranscriptPositionBiotype
ENSG00000154485 (MMP21)
matrix metallopeptidase 21 		ENST00000368808 (MMP21-001) 125766453-125775821 protein_coding
ENSG00000188690 (UROS)
uroporphyrinogen III synthase 		ENST00000368774 (UROS-006) 125807150-125823089 protein_coding
ENST00000368778 (UROS-003) 125802057-125823196 protein_coding
ENST00000368786 (UROS-002) 125788583-125816632 protein_coding
ENST00000368797 (UROS-001) 125788578-125823227 protein_coding
ENST00000420761 (UROS-004) 125794900-125823248 protein_coding
ENST00000462490 (UROS-007) 125791520-125807465 protein_coding
ENST00000464267 (UROS-008) 125788725-125798103 processed_transcript
ENST00000465577 (UROS-010) 125788587-125798100 processed_transcript
ENST00000470483 (UROS-009) 125788577-125795227 processed_transcript
ENST00000484541 (UROS-011) 125788582-125796190 processed_transcript
ENST00000616800 (UROS-012) 125784980-125796163 protein_coding
ENST00000622016 (UROS-013) 125785517-125798119 protein_coding
CIL_0002JY_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030981-ENSMUSG00000030979 CGP 10090 7:133674270-133710072
GeneTranscriptPositionBiotype
ENSMUSG00000030979 (Uros)
uroporphyrinogen III synthase 		ENSMUST00000033276 (Uros-001) 133686365-133709281 protein_coding
ENSMUST00000106144 (Uros-005) 133692134-133709059 protein_coding
ENSMUST00000106145 (Uros-002) 133686356-133709069 protein_coding
ENSMUST00000106146 (Uros-003) 133686356-133708958 protein_coding
ENSMUST00000124759 (Uros-007) 133701893-133709057 protein_coding
ENSMUST00000135760 (Uros-004) 133686243-133709094 retained_intron
ENSMUST00000144789 (Uros-009) 133686961-133698080 processed_transcript
ENSMUST00000151348 (Uros-006) 133701895-133710072 protein_coding
ENSMUST00000153698 (Uros-008) 133701839-133702616 protein_coding
ENSMUSG00000030981 (Mmp21)
matrix metallopeptidase 21 		ENSMUST00000033278 (Mmp21-001) 133674270-133680061 protein_coding
ENSMUST00000122136 (Mmp21-002) 133674356-133680061 protein_coding
ENSMUST00000131894 (Mmp21-003) 133674270-133680061 retained_intron
ENSMUSG00000030983 (Bccip)
BRCA2 and CDKN1A interacting protein 		ENSMUST00000033282 (Bccip-001) 133709333-133721145 protein_coding
ENSMUST00000132885 (Bccip-003) 133709402-133714313 processed_transcript
ENSMUST00000140472 (Bccip-005) 133717379-133719215 retained_intron
ENSMUST00000151711 (Bccip-004) 133714742-133720941 processed_transcript
ENSMUST00000157077 (Bccip-002) 133709348-133715446 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JY_0001ENSDARG00000027491ENSDART00000105309ENSDART00000130190ENSDARG00000076521ENSDART00000114949CIL_0002JY_0002ENSG00000154485ENST00000368808ENSG00000188690ENST00000368774ENST00000368778ENST00000368786ENST00000368797ENST00000420761ENST00000462490ENST00000464267ENST00000465577ENST00000470483ENST00000484541ENST00000616800ENST00000622016CIL_0002JY_0003ENSMUSG00000030979ENSMUST00000033276ENSMUST00000106144ENSMUST00000106145ENSMUST00000106146ENSMUST00000124759ENSMUST00000135760ENSMUST00000144789ENSMUST00000151348ENSMUST00000153698ENSMUSG00000030981ENSMUST00000033278ENSMUST00000122136ENSMUST00000131894ENSMUSG00000030983ENSMUST00000033282ENSMUST00000132885ENSMUST00000140472ENSMUST00000151711ENSMUST00000157077
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JY_0001ENSDARG00000027491ENSDART00000105309ENSDART00000130190ENSDARG00000076521ENSDART00000114949CIL_0002JY_0002ENSG00000154485ENST00000368808ENSG00000188690ENST00000368774ENST00000368778ENST00000368797ENST00000420761ENST00000462490CIL_0002JY_0003ENSMUSG00000030979ENSMUST00000033276ENSMUST00000106144ENSMUST00000106145ENSMUST00000106146ENSMUST00000135760ENSMUST00000144789ENSMUST00000151348ENSMUSG00000030981ENSMUST00000033278ENSMUST00000122136ENSMUST00000131894ENSMUSG00000030983ENSMUST00000033282ENSMUST00000151711ENSMUST00000157077
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027491 ENSDART00000105309 N/A N/A N/A 11.322±4.58 N/A N/A 12.389±5.08 13.441±3.09 0.530±0.00 N/A 6.377±0.00 N/A N/A N/A
ENSDART00000130190 N/A N/A N/A 1.505±0.00 N/A N/A 2.491±0.34 12.122±0.00 0.208±0.00 N/A 1.916±0.00 N/A N/A N/A
ENSDARG00000076521 ENSDART00000114949 N/A N/A N/A 0.199±0.05 N/A N/A 0.929±0.00 0.208±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154485 ENST00000368808 0.044±0.00 0.009±0.00 N/A 0.057±0.00 0.026±0.00 0.033±0.00 0.025±0.00 0.093±0.00 0.008±0.00 N/A N/A 0.201±0.17 0.033±0.00 0.137±0.01
ENSG00000188690 ENST00000368774 N/A N/A N/A N/A 2.371±0.00 1.848±0.00 N/A N/A 1.363±0.00 2.324±0.00 N/A N/A N/A N/A
ENST00000368778 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.810±0.00 N/A 1.152±0.00 N/A 3.520±0.20
ENST00000368786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368797 5.624±0.00 9.775±0.00 2.717±0.00 21.208±4.53 11.532±10.68 5.016±3.24 15.659±12.39 12.908±6.82 9.634±8.72 2.937±1.74 7.680±4.69 13.842±7.82 14.333±2.64 18.847±1.98
ENST00000420761 4.891±0.00 7.572±0.00 N/A 24.231±16.55 8.142±6.93 5.449±0.00 8.905±0.00 9.410±0.00 N/A 3.594±0.00 3.202±0.00 6.877±0.00 8.858±0.00 13.715±2.63
ENST00000462490 N/A 2.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.499±0.00 0.963±0.00 1.949±0.00
ENST00000464267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030979 ENSMUST00000033276 2.773±0.75 2.366±0.00 N/A 3.035±1.64 1.846±0.53 1.916±0.46 2.691±0.63 2.621±0.56 3.229±0.95 N/A 3.646±1.33 3.338±1.02 3.804±0.04 1.164±0.13
ENSMUST00000106144 N/A N/A N/A 2.372±0.00 N/A N/A N/A N/A N/A N/A N/A 3.668±0.00 4.631±2.39 1.335±0.00
ENSMUST00000106145 3.710±0.78 8.942±2.01 3.945±0.97 3.125±1.07 4.006±0.64 5.034±1.65 4.498±1.29 7.400±1.46 7.773±4.85 2.979±0.64 3.432±0.96 4.451±1.45 3.898±1.73 2.497±0.25
ENSMUST00000106146 N/A N/A N/A 2.837±0.25 3.052±0.75 N/A N/A N/A 44.495±25.70 N/A 2.047±1.05 3.241±0.71 5.294±3.61 0.561±0.00
ENSMUST00000124759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135760 4.327±1.35 N/A 6.360±2.98 6.174±3.35 6.285±0.61 2.832±1.81 1.263±0.00 3.185±0.30 16.872±12.37 2.723±1.15 1.025±0.22 4.609±1.43 3.987±0.99 1.604±0.06
ENSMUST00000144789 N/A N/A N/A N/A 9.779±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.885±6.22 N/A
ENSMUST00000153698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030981 ENSMUST00000033278 N/A N/A 0.004±0.00 0.001±0.00 N/A 0.032±0.00 N/A N/A 0.020±0.00 N/A N/A N/A 0.038±0.00 N/A
ENSMUST00000122136 0.028±0.01 0.089±0.01 N/A 0.051±0.00 N/A 0.111±0.00 0.042±0.01 0.017±0.00 0.006±0.00 0.025±0.00 N/A 0.041±0.02 0.027±0.00 0.014±0.00
ENSMUST00000131894 0.022±0.00 N/A 0.012±0.00 0.043±0.04 N/A N/A N/A 0.016±0.01 0.027±0.02 0.018±0.00 N/A 0.036±0.02 0.054±0.03 0.020±0.00
ENSMUSG00000030983 ENSMUST00000033282 N/A N/A 35.659±3.88 18.224±1.24 N/A N/A 8.568±0.59 9.321±0.59 24.073±14.89 N/A 36.392±3.94 26.161±1.37 30.749±9.32 N/A
ENSMUST00000132885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151711 N/A N/A N/A 37.343±0.00 N/A N/A 12.890±1.90 22.757±5.44 16.015±4.10 13.589±1.54 N/A 43.626±23.92 53.921±26.75 14.284±0.00
ENSMUST00000157077 N/A N/A N/A 16.979±0.00 N/A N/A N/A N/A N/A N/A N/A 34.102±0.00 23.774±0.00 8.018±0.00

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