C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA2 and CDKN1A interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033282 Bccip-001 ENSMUSG00000030983 10090 + 7:133709333-133721145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000033282
Transcript ID Bladder Brain Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000033282 35.659±3.88 18.224±1.24 8.568±0.59 9.321±0.59 24.073±14.89 36.392±3.94 26.161±1.37 30.749±9.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JY CIL_0002JY_0003 CGP 7:133674270-133710072
CIL_0001V6 CIL_0001V6_0002 CGP 7:133686243-133721145
CIL_0001V9 CIL_0001V9_0002 CGP 7:133709333-133782726

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0006281 IEA DNA repair
GO:0007049 IEA cell cycle
GO:0019207 IEA kinase regulator activity
GO:0019908 IEA nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0044822 IEA poly(A) RNA binding
GO:0061101 IEA neuroendocrine cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130175 AP3B1 (1 of 2)-201 protein_coding Danio_rerio 0.00005 55

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