C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein C pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399515 HNRNPCP2-001 ENSG00000204253 9606 + 2:189923336-189924216 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399515
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399515 0.031±0.00 0.049±0.00 0.017±0.00 0.105±0.05 0.162±0.13 0.245±0.00 0.083±0.07 0.086±0.06 0.028±0.00 0.015±0.00 0.327±0.35 0.227±0.11 0.398±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KB CIL_0002KB_0001 CGP 2:189879609-190203484

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122361 Gm12696-001 processed_pseudogene Mus_musculus 0 1068
ENSMUST00000117947 Gm12445-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000174284 Gm18889-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000164655 Hnrnpc-202 protein_coding Mus_musculus 0 640
ENSMUST00000111610 Hnrnpc-201 protein_coding Mus_musculus 0 640
ENSMUST00000190510 RP24-495G2.1-001 processed_pseudogene Mus_musculus 0 390

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