C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109379 Bdp1-003 ENSMUSG00000049658 10090 - 13:100023305-100103838 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000109379
Transcript ID Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000109379 1.841±1.32 0.287±0.00 0.161±0.02 0.133±0.00 0.617±0.39 0.152±0.01 4.229±2.20 2.174±1.96 1.084±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KO CIL_0002KO_0002 CGP 13:99948533-100104070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 ISO nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358731 BDP1-016 protein_coding Homo_sapiens 0 1663
ENST00000380675 BDP1-201 protein_coding Homo_sapiens 0 1661
ENST00000508917 BDP1-018 retained_intron Homo_sapiens 0 1663
ENST00000611966 AC245931.1-202 protein_coding Homo_sapiens 0 1668
ENST00000613844 AC245931.1-201 protein_coding Homo_sapiens 0 1666
ENST00000616093 BDP1-202 protein_coding Homo_sapiens 0 1661
ENST00000617085 BDP1-016 protein_coding Homo_sapiens 0 1663
ENST00000617176 BDP1-018 retained_intron Homo_sapiens 0 1663

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