C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002N8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146066-ENSG00000175416 CGP 9606 5:176388747-176416569
GeneTranscriptPositionBiotype
ENSG00000146066 (HIGD2A)
HIG1 hypoxia inducible domain family, member 2A 		ENST00000274787 (HIGD2A-001) 176388747-176389771 protein_coding
ENSG00000175414 (ARL10)
ADP-ribosylation factor-like 10 		ENST00000310389 (ARL10-001) 176365468-176381909 protein_coding
ENST00000503175 (ARL10-003) 176368947-176388638 protein_coding
ENST00000507151 (ARL10-004) 176366538-176369127 retained_intron
ENST00000514533 (ARL10-002) 176368850-176401865 protein_coding
ENSG00000175416 (CLTB)
clathrin, light chain B 		ENST00000310418 (CLTB-001) 176392455-176416569 protein_coding
ENST00000345807 (CLTB-002) 176392455-176416569 protein_coding
ENST00000502877 (CLTB-005) 176392793-176416538 protein_coding
ENST00000507821 (CLTB-007) 176405590-176406340 processed_transcript
ENST00000508425 (CLTB-006) 176392642-176416261 protein_coding
ENST00000509319 (CLTB-004) 176406167-176407591 processed_transcript
ENST00000510734 (CLTB-003) 176392649-176416539 nonsense_mediated_decay
CIL_0002N8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025868-ENSMUSG00000047547 CGP 10090 13:54590207-54611344
GeneTranscriptPositionBiotype
ENSMUSG00000025868 (Higd2a)
HIG1 domain family, member 2A 		ENSMUST00000026986 (Higd2a-001) 54590207-54591158 protein_coding
ENSMUSG00000047547 (Cltb)
clathrin, light polypeptide (Lcb) 		ENSMUST00000049575 (Cltb-003) 54593585-54611292 protein_coding
ENSMUST00000091609 (Cltb-001) 54592401-54611344 protein_coding
ENSMUST00000140142 (Cltb-004) 54593538-54599161 protein_coding
ENSMUST00000146301 (Cltb-002) 54596040-54611292 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002N8_0001ENSG00000146066ENST00000274787ENSG00000175414ENST00000310389ENST00000503175ENST00000507151ENST00000514533ENSG00000175416ENST00000310418ENST00000345807ENST00000502877ENST00000507821ENST00000508425ENST00000509319ENST00000510734CIL_0002N8_0002ENSMUSG00000025868ENSMUST00000026986ENSMUSG00000047547ENSMUST00000049575ENSMUST00000091609ENSMUST00000140142ENSMUST00000146301
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002N8_0001ENSG00000146066ENST00000274787ENSG00000175414ENST00000310389ENSG00000175416ENST00000310418ENST00000345807ENST00000502877ENST00000508425ENST00000510734CIL_0002N8_0002ENSMUSG00000025868ENSMUST00000026986ENSMUSG00000047547ENSMUST00000049575ENSMUST00000091609ENSMUST00000140142ENSMUST00000146301
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146066 ENST00000274787 57.805±0.00 97.336±0.00 2.127±0.00 33.375±0.00 50.959±45.16 46.740±41.80 59.272±55.18 37.086±32.25 56.910±0.00 39.139±34.43 82.781±73.88 101.657±48.18 96.429±44.67 45.482±20.10
ENSG00000175414 ENST00000310389 0.849±0.00 1.653±0.00 0.095±0.00 1.504±0.28 0.803±0.11 0.661±0.34 0.519±0.42 0.619±0.29 0.347±0.00 0.693±0.08 0.626±0.36 1.606±0.43 0.613±0.00 0.995±0.44
ENST00000503175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175416 ENST00000310418 N/A N/A N/A 49.450±25.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000345807 52.639±0.00 72.603±0.00 2.663±0.00 14.865±11.67 36.188±30.62 44.718±31.94 56.665±46.61 33.896±29.10 21.566±12.88 38.609±33.09 52.941±30.01 89.588±56.34 228.848±48.60 60.249±1.88
ENST00000502877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.114±0.00 1.795±0.00 N/A N/A
ENST00000507821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508425 31.218±0.00 37.379±0.00 N/A 43.255±0.00 39.034±0.00 47.879±0.00 N/A 26.690±0.00 12.362±0.00 34.338±0.00 47.792±0.00 N/A N/A 29.412±0.00
ENST00000509319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510734 N/A N/A 0.642±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025868 ENSMUST00000026986 104.910±40.55 109.294±9.99 88.692±15.11 44.173±19.53 78.192±13.25 139.204±4.44 102.702±28.10 188.258±12.08 57.730±8.57 60.942±4.43 141.139±5.66 42.269±19.21 40.048±25.64 44.413±19.68
ENSMUSG00000047547 ENSMUST00000049575 15.412±5.55 23.626±3.57 20.458±3.31 60.135±51.70 22.283±3.32 52.709±6.83 16.566±6.11 32.239±5.41 11.566±5.70 34.478±2.31 27.668±4.58 11.349±2.85 37.637±21.18 4.363±2.26
ENSMUST00000091609 12.351±3.27 10.247±1.49 23.581±1.24 10.499±1.09 9.915±2.54 27.632±4.07 10.033±1.94 17.561±1.05 8.418±2.92 21.449±1.22 20.669±1.01 6.384±2.12 18.279±8.75 2.990±0.50
ENSMUST00000140142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.377±4.64 N/A 9.185±0.00
ENSMUST00000146301 N/A N/A N/A 3.708±0.72 0.921±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading