C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002NK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100220-ENSG00000184459 CGP 9606 22:32387582-32464484
GeneTranscriptPositionBiotype
ENSG00000100220 (RTCB)
RNA 2',3'-cyclic phosphate and 5'-OH ligase 		ENST00000216038 (RTCB-001) 32387582-32412255 protein_coding
ENST00000463455 (RTCB-003) 32407879-32412248 retained_intron
ENST00000476619 (RTCB-006) 32398042-32407526 processed_transcript
ENST00000485373 (RTCB-007) 32398048-32407409 processed_transcript
ENST00000487704 (RTCB-004) 32401562-32412241 retained_intron
ENST00000498434 (RTCB-008) 32397948-32399985 retained_intron
ENSG00000184459 (BPIFC)
BPI fold containing family C 		ENST00000300399 (BPIFC-201) 32413847-32457386 protein_coding
ENST00000397450 (BPIFC-011) 32453334-32464449 protein_coding
ENST00000397452 (BPIFC-010) 32413847-32464484 protein_coding
ENST00000432451 (BPIFC-202) 32414303-32457386 protein_coding
ENST00000534972 (BPIFC-203) 32413847-32457386 protein_coding
CIL_0002NK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001783-ENSMUSG00000050108 CGP 10090 10:85938637-86011895
GeneTranscriptPositionBiotype
ENSMUSG00000001783 (Rtcb)
RNA 2',3'-cyclic phosphate and 5'-OH ligase 		ENSMUST00000001834 (Rtcb-001) 85938637-85957823 protein_coding
ENSMUST00000139413 (Rtcb-002) 85948860-85955779 retained_intron
ENSMUSG00000050108 (Bpifc)
BPI fold containing family C 		ENSMUST00000061699 (Bpifc-001) 85959340-86011895 protein_coding
ENSMUST00000105304 (Bpifc-002) 85995901-86011856 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NK_0001ENSG00000100220ENST00000216038ENST00000463455ENST00000476619ENST00000485373ENST00000487704ENST00000498434ENSG00000184459ENST00000300399ENST00000397450ENST00000397452ENST00000432451ENST00000534972CIL_0002NK_0002ENSMUSG00000001783ENSMUST00000001834ENSMUST00000139413ENSMUSG00000050108ENSMUST00000061699ENSMUST00000105304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NK_0001ENSG00000100220ENST00000216038ENST00000485373ENST00000498434ENSG00000184459ENST00000300399ENST00000397450ENST00000432451ENST00000534972CIL_0002NK_0002ENSMUSG00000001783ENSMUST00000001834ENSMUSG00000050108ENSMUST00000061699
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100220 ENST00000216038 22.687±0.00 18.755±0.00 3.977±0.00 19.945±7.46 19.393±0.00 13.802±6.16 7.860±4.70 20.531±11.91 18.556±8.74 9.026±2.49 10.467±6.39 27.318±7.56 39.735±7.74 22.476±1.63
ENST00000463455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.798±0.00 N/A N/A N/A
ENST00000487704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498434 N/A N/A N/A N/A 5.862±0.00 6.687±0.00 2.311±0.00 N/A N/A 7.040±0.00 3.221±0.00 N/A N/A N/A
ENSG00000184459 ENST00000300399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A 0.286±0.00
ENST00000397450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.01 N/A
ENST00000397452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432451 N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A
ENST00000534972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 0.066±0.02 0.305±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001783 ENSMUST00000001834 43.680±9.39 20.566±1.72 49.802±0.84 46.903±17.12 31.567±4.58 29.503±5.57 23.897±1.66 42.683±3.13 37.811±16.93 33.203±9.83 18.682±0.76 50.363±18.78 59.438±15.37 15.233±2.51
ENSMUST00000139413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050108 ENSMUST00000061699 0.015±0.00 0.275±0.11 0.061±0.02 0.021±0.01 0.282±0.20 N/A 0.022±0.00 0.064±0.02 0.016±0.01 1.120±0.82 0.073±0.02 0.601±0.35 0.047±0.05 0.168±0.12
ENSMUST00000105304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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