C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000239666 PDZD11-007 ENSG00000120509 9606 - X:70286595-70289979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000239666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000239666 10.120±0.00 11.896±0.00 0.423±0.00 16.655±4.08 8.097±4.78 19.309±0.00 5.457±5.05 13.493±8.04 8.562±0.00 6.738±3.85 3.831±2.46 16.344±7.56 18.384±1.97 8.708±5.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PK CIL_0002PK_0001 CGP X:70286595-70420832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0005829 IDA cytosol
GO:0008022 IPI protein C-terminus binding
GO:0016323 IDA basolateral plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059099 Pdzd11-001 protein_coding Mus_musculus 0 664
ENSMUST00000015812 Pdzd11-003 protein_coding Mus_musculus 0 664
ENSMUST00000144643 Pdzd11-002 retained_intron Mus_musculus 0 664
ENSMUST00000151548 Pdzd11-004 processed_transcript Mus_musculus 0 638

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