C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002Q0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042624-ENSDARG00000074361 CGP 7955 18:6588218-6699581
GeneTranscriptPositionBiotype
ENSDARG00000042624 (pak1)
p21/Cdc42/Rac1-activated kinase 1
ENSDART00000009560 (pak1-201) 6588218-6625532 protein_coding
ENSDARG00000074361 (GDPD4 (1 of 3))
glycerophosphodiester phosphodiesterase domain containing 4
ENSDART00000113963 (GDPD4 (1 of 3)-201) 6678642-6699581 protein_coding
CIL_0002Q0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074186-ENSDARG00000078196 CGP 7955 18:6355779-6439471
GeneTranscriptPositionBiotype
ENSDARG00000078196 (gdpd4a)
glycerophosphodiester phosphodiesterase domain containing 4a
ENSDART00000111380 (gdpd4a-001) 6395511-6439471 protein_coding
ENSDART00000156253 (gdpd4a-201) 6411106-6439466 protein_coding
CIL_0002Q0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030774-ENSMUSG00000035582 CGP 10090 7:97842935-98049663
GeneTranscriptPositionBiotype
ENSMUSG00000030774 (Pak1)
p21 protein (Cdc42/Rac)-activated kinase 1
ENSMUST00000033040 (Pak1-001) 97842935-97912381 protein_coding
ENSMUST00000156637 (Pak1-002) 97842935-97912381 nonsense_mediated_decay
ENSMUSG00000035582 (Gdpd4)
glycerophosphodiester phosphodiesterase domain containing 4
ENSMUST00000041860 (Gdpd4-001) 97919955-98049663 protein_coding
ENSMUST00000170049 (Gdpd4-201) 97957821-98048611 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Q0_0001ENSDARG00000042624ENSDART00000009560ENSDARG00000074361ENSDART00000113963CIL_0002Q0_0002ENSDARG00000078196ENSDART00000111380ENSDART00000156253CIL_0002Q0_0003ENSMUSG00000030774ENSMUST00000033040ENSMUST00000156637ENSMUSG00000035582ENSMUST00000041860ENSMUST00000170049
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Q0_0001ENSDARG00000042624ENSDART00000009560ENSDARG00000074361ENSDART00000113963CIL_0002Q0_0002ENSDARG00000078196ENSDART00000111380ENSDART00000156253CIL_0002Q0_0003ENSMUSG00000030774ENSMUST00000033040ENSMUST00000156637ENSMUSG00000035582ENSMUST00000041860ENSMUST00000170049
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042624 ENSDART00000009560 N/A N/A N/A 11.744±0.00 N/A N/A 2.335±1.43 0.656±0.38 0.138±0.00 N/A 0.625±0.00 N/A N/A N/A
ENSDARG00000074361 ENSDART00000113963 N/A N/A N/A 2.777±0.15 N/A N/A 0.092±0.00 N/A 0.027±0.00 N/A 0.087±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000078196 ENSDART00000111380 N/A N/A N/A 2.557±0.27 N/A N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000156253 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A 0.073±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030774 ENSMUST00000033040 2.634±1.96 1.548±0.69 5.376±0.15 49.916±12.54 4.389±0.89 3.798±1.39 0.272±0.07 5.748±3.60 2.253±1.99 2.680±0.35 7.625±0.86 2.187±0.99 2.295±1.34 1.062±0.45
ENSMUST00000156637 N/A 1.780±0.40 N/A N/A 2.389±0.36 2.798±0.27 0.134±0.05 2.181±0.77 0.178±0.06 1.574±0.52 N/A 1.489±0.74 N/A N/A
ENSMUSG00000035582 ENSMUST00000041860 N/A 0.058±0.02 0.002±0.00 0.015±0.01 0.029±0.01 N/A 0.009±0.00 0.011±0.00 0.004±0.00 N/A 0.022±0.01 0.006±0.00 0.018±0.02 7.890±0.51
ENSMUST00000170049 N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A 0.046±0.00 N/A 0.016±0.00 0.015±0.00 2.150±0.00

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