C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451614 RP11-365F18.1-001 ENSG00000228360 9606 - 7:139227537-139227828 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000451614
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000451614 0.584±0.00 0.185±0.00 0.190±0.00 0.312±0.00 0.173±0.00 0.219±0.00 0.124±0.00 0.054±0.00 1.051±0.00 0.200±0.11 2.699±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QC CIL_0002QC_0001 CGP 7:139133744-139308236

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059980 Rpl37a-201 protein_coding Mus_musculus 0 272
ENSMUST00000099371 Gm4149-201 pseudogene Mus_musculus 0 259
ENSMUST00000117690 Gm14173-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000165488 Gm4613-201 processed_pseudogene Mus_musculus 0 239
ENSMUST00000122133 Gm14251-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000080671 RP24-511K23.2-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000118443 Gm11285-001 unprocessed_pseudogene Mus_musculus 0 202
ENSMUST00000120162 Gm13875-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000119187 Gm16106-001 processed_pseudogene Mus_musculus 5.60519e-45 183
ENSMUST00000118308 Gm13879-001 processed_pseudogene Mus_musculus 2e-34 148
ENSMUST00000118435 Gm12401-001 processed_pseudogene Mus_musculus 6e-20 100

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