C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028469-ENSDARG00000036282 CGP 7955 13:9425931-9533752
GeneTranscriptPositionBiotype
ENSDARG00000028469 (RPS6KA2)
Ribosomal protein S6 kinase 		ENSDART00000044705 (RPS6KA2-201) 9425931-9496258 protein_coding
ENSDARG00000036282 (rnaset2)
ribonuclease T2 		ENSDART00000126780 (rnaset2-201) 9518928-9533143 protein_coding
ENSDART00000128675 (rnaset2-202) 9521448-9533752 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002QE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071242-ENSG00000249141 CGP 9606 6:166409364-166956124
GeneTranscriptPositionBiotype
ENSG00000026297 (RNASET2)
ribonuclease T2 		ENST00000028008 (RNASET2-012) 166929545-166956584 nonsense_mediated_decay
ENST00000358165 (RNASET2-003) 166933375-166957191 retained_intron
ENST00000366855 (RNASET2-007) 166929504-166956611 protein_coding
ENST00000421787 (RNASET2-002) 166929516-166956543 nonsense_mediated_decay
ENST00000467705 (RNASET2-008) 166929633-166944053 processed_transcript
ENST00000476238 (RNASET2-006) 166929540-166957184 protein_coding
ENST00000478180 (RNASET2-004) 166929598-166957141 protein_coding
ENST00000496851 (RNASET2-005) 166933425-166952534 processed_transcript
ENST00000499370 (RNASET2-010) 166933365-166953580 retained_intron
ENST00000508775 (RNASET2-001) 166929504-166956702 protein_coding
ENST00000509073 (RNASET2-013) 166934039-166943239 processed_transcript
ENST00000510083 (RNASET2-011) 166929518-166933049 retained_intron
ENST00000611959 (RNASET2-201) 166938575-166956589 protein_coding
ENST00000620173 (RNASET2-202) 166929525-166956589 protein_coding
ENSG00000071242 (RPS6KA2)
ribosomal protein S6 kinase, 90kDa, polypeptide 2 		ENST00000265678 (RPS6KA2-001) 166409364-166627243 protein_coding
ENST00000366865 (RPS6KA2-002) 166475726-166510310 processed_transcript
ENST00000405189 (RPS6KA2-007) 166412748-166542450 protein_coding
ENST00000481261 (RPS6KA2-006) 166412659-166544690 protein_coding
ENST00000491836 (RPS6KA2-004) 166439889-166459551 processed_transcript
ENST00000503859 (RPS6KA2-003) 166411232-166862551 protein_coding
ENST00000506565 (RPS6KA2-009) 166508223-166862670 protein_coding
ENST00000507350 (RPS6KA2-013) 166498611-166627522 protein_coding
ENST00000507371 (RPS6KA2-011) 166504599-166757911 protein_coding
ENST00000509742 (RPS6KA2-008) 166412296-166423984 processed_transcript
ENST00000510118 (RPS6KA2-005) 166409388-166862511 protein_coding
ENST00000511034 (RPS6KA2-012) 166510280-166627972 protein_coding
ENST00000512860 (RPS6KA2-010) 166504515-166906451 protein_coding
ENSG00000231654 (RPS6KA2-AS1)
RPS6KA2 antisense RNA 1 		ENST00000455390 (RPS6KA2-AS1-001) 166903698-166904835 antisense
ENSG00000232082 (RPS6KA2-IT1)
RPS6KA2 intronic transcript 1 (non-protein coding) 		ENST00000416770 (RPS6KA2-IT1-001) 166460663-166465383 sense_intronic
ENSG00000235008 (RP3-497J21.1)
 ENST00000454907 (RP3-497J21.1-001) 166701094-166702839 processed_pseudogene
ENSG00000235272 (FAM103A2P)
family with sequence similarity 103, member A2 pseudogene 		ENST00000444122 (FAM103A2P-001) 166586124-166586477 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QE_0001ENSDARG00000028469ENSDART00000044705ENSDARG00000036282ENSDART00000126780ENSDART00000128675CIL_0002QE_0002ENSG00000026297ENST00000028008ENST00000358165ENST00000366855ENST00000421787ENST00000467705ENST00000476238ENST00000478180ENST00000496851ENST00000499370ENST00000508775ENST00000509073ENST00000510083ENST00000611959ENST00000620173ENSG00000071242ENST00000265678ENST00000366865ENST00000405189ENST00000481261ENST00000491836ENST00000503859ENST00000506565ENST00000507350ENST00000507371ENST00000509742ENST00000510118ENST00000511034ENST00000512860ENSG00000231654ENST00000455390ENSG00000232082ENST00000416770ENSG00000235008ENST00000454907ENSG00000235272ENST00000444122
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QE_0001ENSDARG00000028469ENSDART00000044705ENSDARG00000036282ENSDART00000126780ENSDART00000128675CIL_0002QE_0002ENSG00000026297ENST00000028008ENST00000476238ENST00000478180ENST00000508775ENSG00000071242ENST00000265678ENST00000503859ENST00000507350ENST00000510118ENSG00000231654ENST00000455390ENSG00000232082ENST00000416770ENSG00000235008ENST00000454907ENSG00000235272ENST00000444122
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028469 ENSDART00000044705 N/A N/A N/A 0.186±0.00 N/A N/A 0.058±0.01 N/A N/A N/A 0.089±0.00 N/A N/A N/A
ENSDARG00000036282 ENSDART00000126780 N/A N/A N/A N/A N/A N/A 5.141±2.32 8.541±4.75 0.788±0.00 N/A N/A N/A N/A N/A
ENSDART00000128675 N/A N/A N/A 4.283±0.00 N/A N/A 1.769±0.00 9.602±0.00 1.522±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000026297 ENST00000028008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.011±0.00
ENST00000358165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 68.228±31.99 23.557±12.48 11.662±0.00
ENST00000478180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.281±0.00 N/A N/A
ENST00000496851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000499370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508775 N/A 50.755±0.00 2.704±0.00 12.381±0.00 14.554±3.84 8.673±0.00 N/A 10.178±0.00 7.178±1.48 9.350±0.00 N/A 27.266±3.20 24.437±5.68 13.135±0.00
ENST00000509073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000071242 ENST00000265678 20.367±0.00 N/A 1.231±0.00 11.078±8.65 6.497±3.78 3.869±2.94 14.530±12.23 6.667±4.78 2.649±0.00 16.944±11.66 3.516±1.38 6.814±2.74 4.518±2.67 3.212±0.39
ENST00000366865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503859 N/A N/A N/A N/A N/A N/A N/A N/A 1.884±0.00 N/A N/A N/A N/A 1.766±0.00
ENST00000506565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.360±0.00 N/A N/A N/A
ENST00000507371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510118 N/A N/A N/A 3.308±0.00 N/A 0.905±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231654 ENST00000455390 N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232082 ENST00000416770 0.101±0.00 0.505±0.00 N/A 0.329±0.00 0.115±0.00 0.069±0.00 0.482±0.35 N/A N/A 0.607±0.00 0.158±0.00 0.046±0.00 0.118±0.00 0.088±0.00
ENSG00000235008 ENST00000454907 N/A N/A 0.028±0.00 0.038±0.00 0.160±0.00 N/A 0.028±0.01 N/A 0.131±0.00 0.093±0.00 N/A 0.501±0.00 N/A N/A
ENSG00000235272 ENST00000444122 N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A 2.418±2.37 N/A N/A N/A N/A

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