C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease T2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508775 RNASET2-001 ENSG00000026297 9606 - 6:166929504-166956702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000508775
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000508775 50.755±0.00 2.704±0.00 12.381±0.00 14.554±3.84 8.673±0.00 10.178±0.00 7.178±1.48 9.350±0.00 27.266±3.20 24.437±5.68 13.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QE CIL_0002QE_0002 CGP 6:166409364-166956124
CIL_0004W6 CIL_0004W6_0001 CGP 6:166929504-167052713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004540 IDA ribonuclease activity
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0005764 IDA lysosome
GO:0005788 IDA endoplasmic reticulum lumen
GO:0006401 IDA RNA catabolic process
GO:0033897 IEA ribonuclease T2 activity
GO:0070062 IDA extracellular vesicular exosome
GO:0090501 IDA RNA phosphodiester bond hydrolysis
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089119 Rnaset2b-201 protein_coding Mus_musculus 0 473
ENSMUST00000097420 Rnaset2a-201 protein_coding Mus_musculus 0 468
ENSMUST00000179728 Rnaset2b-202 protein_coding Mus_musculus 0 455

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