C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribonuclease T2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000028008 RNASET2-012 ENSG00000026297 9606 - 6:166929545-166956584 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000028008
Transcript ID Testis
ENST00000028008 9.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QE CIL_0002QE_0002 CGP 6:166409364-166956124
CIL_0004W6 CIL_0004W6_0001 CGP 6:166929504-167052713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0033897 IEA ribonuclease T2 activity
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089119 Rnaset2b-201 protein_coding Mus_musculus 0 436
ENSMUST00000179728 Rnaset2b-202 protein_coding Mus_musculus 0 436
ENSMUST00000097420 Rnaset2a-201 protein_coding Mus_musculus 0 436

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