C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002S2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130300-ENSG00000130303 CGP 9606 19:17351448-17405648
GeneTranscriptPositionBiotype
ENSG00000130300 (PLVAP)
plasmalemma vesicle associated protein 		ENST00000252590 (PLVAP-001) 17351448-17377350 protein_coding
ENST00000595816 (PLVAP-003) 17351450-17366151 protein_coding
ENST00000599426 (PLVAP-002) 17365416-17377342 protein_coding
ENSG00000130303 (BST2)
bone marrow stromal cell antigen 2 		ENST00000252593 (BST2-001) 17402939-17405648 protein_coding
ENST00000527220 (BST2-003) 17403791-17405530 processed_transcript
ENST00000533098 (BST2-004) 17403241-17404537 retained_intron
ENSG00000269350 (CTD-2278I10.1)
 ENST00000597592 (CTD-2278I10.1-001) 17360932-17362753 antisense
ENSG00000269720 (CTD-2521M24.5)
 ENST00000597169 (CTD-2521M24.5-001) 17391429-17392284 lincRNA
CIL_0002S2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034845-ENSMUSG00000046718 CGP 10090 8:71497754-71537437
GeneTranscriptPositionBiotype
ENSMUSG00000007610 (Gtpbp3)
GTP binding protein 3 		ENSMUST00000007754 (Gtpbp3-001) 71488103-71493400 protein_coding
ENSMUST00000095259 (Gtpbp3-002) 71488721-71493400 nonsense_mediated_decay
ENSMUST00000124349 (Gtpbp3-004) 71488743-71493400 retained_intron
ENSMUST00000127741 (Gtpbp3-003) 71488751-71493400 nonsense_mediated_decay
ENSMUST00000132907 (Gtpbp3-006) 71488734-71489578 retained_intron
ENSMUST00000146551 (Gtpbp3-007) 71489459-71491411 retained_intron
ENSMUST00000150969 (Gtpbp3-005) 71488728-71499583 nonsense_mediated_decay
ENSMUST00000168847 (Gtpbp3-201) 71488103-71493400 protein_coding
ENSMUSG00000034845 (Plvap)
plasmalemma vesicle associated protein 		ENSMUST00000048452 (Plvap-201) 71497754-71511769 protein_coding
ENSMUSG00000046718 (Bst2)
bone marrow stromal cell antigen 2 		ENSMUST00000051672 (Bst2-201) 71534264-71537437 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S2_0001ENSG00000130300ENST00000252590ENST00000595816ENST00000599426ENSG00000130303ENST00000252593ENST00000527220ENST00000533098ENSG00000269350ENST00000597592ENSG00000269720ENST00000597169CIL_0002S2_0002ENSMUSG00000007610ENSMUST00000007754ENSMUST00000095259ENSMUST00000124349ENSMUST00000127741ENSMUST00000132907ENSMUST00000146551ENSMUST00000150969ENSMUST00000168847ENSMUSG00000034845ENSMUST00000048452ENSMUSG00000046718ENSMUST00000051672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S2_0001ENSG00000130300ENST00000252590ENST00000599426ENSG00000130303ENST00000252593ENST00000533098ENSG00000269350ENST00000597592ENSG00000269720ENST00000597169CIL_0002S2_0002ENSMUSG00000007610ENSMUST00000007754ENSMUST00000095259ENSMUST00000124349ENSMUST00000127741ENSMUST00000146551ENSMUST00000150969ENSMUSG00000034845ENSMUST00000048452ENSMUSG00000046718ENSMUST00000051672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130300 ENST00000252590 214.958±0.00 219.881±0.00 3.819±0.00 1.292±1.11 77.499±66.05 155.574±150.88 6.775±6.02 37.201±36.56 3.322±0.96 11.461±9.19 15.487±14.08 19.588±11.91 71.895±29.51 22.271±0.00
ENST00000595816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599426 120.345±0.00 N/A 7.035±0.00 N/A 9.898±0.00 N/A 0.741±0.00 N/A 5.976±0.00 3.649±0.00 N/A 63.631±0.00 67.557±0.00 5.735±0.00
ENSG00000130303 ENST00000252593 190.404±0.00 159.416±0.00 7.916±0.00 10.355±6.43 75.855±60.02 83.507±74.58 15.968±11.31 56.996±8.48 38.039±27.27 86.770±61.67 10.329±6.76 302.500±312.14 244.649±63.19 89.874±61.52
ENST00000527220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.629±0.00 N/A N/A
ENSG00000269350 ENST00000597592 0.184±0.00 0.466±0.00 N/A 0.031±0.00 0.265±0.00 0.220±0.00 N/A 0.495±0.00 N/A 1.154±0.00 N/A 0.425±0.31 0.164±0.00 0.251±0.13
ENSG00000269720 ENST00000597169 0.080±0.00 0.211±0.00 N/A 0.228±0.00 0.172±0.02 0.203±0.00 0.066±0.05 0.109±0.00 0.037±0.00 0.133±0.11 0.130±0.00 1.619±0.04 0.276±0.10 0.144±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007610 ENSMUST00000007754 1.848±0.32 N/A 1.661±0.14 0.879±0.00 1.811±0.00 N/A 1.325±0.00 1.111±0.03 N/A 1.226±0.10 N/A N/A 0.627±0.00 0.585±0.21
ENSMUST00000095259 7.245±0.34 15.416±2.80 3.688±0.56 4.770±0.54 8.551±3.41 9.492±1.34 5.336±0.99 6.749±1.39 4.750±0.82 5.681±0.98 1.992±0.37 13.758±1.88 4.569±2.17 0.964±0.48
ENSMUST00000124349 2.647±0.86 2.891±0.31 2.182±0.73 4.130±0.27 2.448±0.35 1.866±0.32 1.283±0.10 1.189±0.23 1.174±0.20 2.244±0.41 0.988±0.02 3.729±1.48 1.274±0.41 0.616±0.17
ENSMUST00000127741 N/A N/A 1.254±0.13 N/A 1.670±0.00 N/A N/A 2.222±0.00 0.707±0.00 N/A 0.770±0.18 3.050±1.16 2.171±1.39 N/A
ENSMUST00000132907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146551 N/A N/A N/A 12.584±0.00 N/A N/A N/A N/A N/A N/A N/A 15.656±0.00 8.085±0.00 1.928±0.00
ENSMUST00000150969 1.710±0.03 7.183±2.19 1.731±0.26 3.535±1.42 2.431±0.34 4.186±1.00 N/A 1.636±0.17 1.647±0.52 2.435±0.69 1.019±0.27 5.258±1.48 1.505±0.48 0.476±0.17
ENSMUST00000168847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034845 ENSMUST00000048452 62.453±16.25 200.914±30.72 32.604±0.56 4.501±1.33 123.384±55.81 90.679±12.79 16.697±2.52 216.477±14.76 32.920±18.20 448.580±177.20 6.221±1.78 41.152±17.79 53.736±42.29 0.641±0.38
ENSMUSG00000046718 ENSMUST00000051672 177.284±104.25 192.661±4.76 50.481±1.95 4.242±1.25 174.290±81.08 69.061±7.95 33.574±9.01 69.889±23.11 174.331±148.33 205.330±41.56 7.461±1.78 569.817±253.54 177.583±67.35 6.309±2.75

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