C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095259 Gtpbp3-002 ENSMUSG00000007610 10090 + 8:71488721-71493400 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095259 7.245±0.34 15.416±2.80 3.688±0.56 4.770±0.54 8.551±3.41 9.492±1.34 5.336±0.99 6.749±1.39 4.750±0.82 5.681±0.98 1.992±0.37 13.758±1.88 4.569±2.17 0.964±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E0 CIL_0004E0_0003 CGP 8:71476023-71499583
CIL_00061V CIL_00061V_0002 CGP 8:71488103-71511769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0006400 IEA tRNA modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324894 GTPBP3-004 protein_coding Homo_sapiens 0 582
ENST00000358792 GTPBP3-006 protein_coding Homo_sapiens 0 586
ENST00000361619 GTPBP3-001 protein_coding Homo_sapiens 0 582
ENST00000598038 GTPBP3-002 processed_transcript Homo_sapiens 0 289
ENST00000600625 GTPBP3-005 protein_coding Homo_sapiens 0 289

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