C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127741 Gtpbp3-003 ENSMUSG00000007610 10090 + 8:71488751-71493400 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverMuscleOvaryPlacentaENSMUST00000127741
Transcript ID Bladder Breast Kidney Liver Muscle Ovary Placenta
ENSMUST00000127741 1.254±0.13 1.670±0.00 2.222±0.00 0.707±0.00 0.770±0.18 3.050±1.16 2.171±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E0 CIL_0004E0_0003 CGP 8:71476023-71499583
CIL_00061V CIL_00061V_0002 CGP 8:71488103-71511769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324894 GTPBP3-004 protein_coding Homo_sapiens 0 632
ENST00000358792 GTPBP3-006 protein_coding Homo_sapiens 0 577
ENST00000361619 GTPBP3-001 protein_coding Homo_sapiens 0 632
ENST00000598038 GTPBP3-002 processed_transcript Homo_sapiens 0 289
ENST00000600625 GTPBP3-005 protein_coding Homo_sapiens 0 289

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