C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000007754 Gtpbp3-001 ENSMUSG00000007610 10090 + 8:71488103-71493400 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLungPlacentaTestisENSMUST00000007754
Transcript ID Adipose Bladder Brain Breast Heart Kidney Lung Placenta Testis
ENSMUST00000007754 1.848±0.32 1.661±0.14 0.879±0.00 1.811±0.00 1.325±0.00 1.111±0.03 1.226±0.10 0.627±0.00 0.585±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E0 CIL_0004E0_0003 CGP 8:71476023-71499583
CIL_00061V CIL_00061V_0002 CGP 8:71488103-71511769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0006400 IEA tRNA modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324894 GTPBP3-004 protein_coding Homo_sapiens 0 1033
ENST00000358792 GTPBP3-006 protein_coding Homo_sapiens 0 577
ENST00000361619 GTPBP3-001 protein_coding Homo_sapiens 0 1022
ENST00000598038 GTPBP3-002 processed_transcript Homo_sapiens 0 289
ENST00000600625 GTPBP3-005 protein_coding Homo_sapiens 0 289

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