C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002SV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059817-ENSDARG00000027109 CGP 7955 5:42724184-42761350
GeneTranscriptPositionBiotype
ENSDARG00000027109 (zfr)
zinc finger RNA binding protein 		ENSDART00000074789 (zfr-001) 42743318-42761350 protein_coding
ENSDART00000129415 (zfr-201) 42744743-42761331 protein_coding
ENSDART00000130579 (zfr-002) 42751927-42761350 processed_transcript
ENSDART00000134891 (zfr-003) 42743337-42761348 processed_transcript
ENSDART00000136451 (zfr-004) 42744831-42747500 processed_transcript
ENSDARG00000059817 (mtmr12)
myotubularin related protein 12 		ENSDART00000083561 (mtmr12-001) 42724184-42742823 protein_coding
CIL_0002SV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150712-ENSG00000056097 CGP 9606 5:32226994-32444761
GeneTranscriptPositionBiotype
ENSG00000056097 (ZFR)
zinc finger RNA binding protein 		ENST00000265069 (ZFR-001) 32354350-32444761 protein_coding
ENST00000502988 (ZFR-007) 32354629-32364938 retained_intron
ENST00000505204 (ZFR-008) 32419820-32444496 retained_intron
ENST00000505366 (ZFR-002) 32406727-32444738 retained_intron
ENST00000507465 (ZFR-004) 32355648-32390317 nonsense_mediated_decay
ENST00000510369 (ZFR-005) 32354852-32383819 processed_transcript
ENST00000514356 (ZFR-006) 32354351-32380424 retained_intron
ENST00000616882 (ZFR-201) 32406877-32444738 protein_coding
ENSG00000150712 (MTMR12)
myotubularin related protein 12 		ENST00000264934 (MTMR12-002) 32229608-32312969 protein_coding
ENST00000280285 (MTMR12-003) 32226994-32312938 protein_coding
ENST00000382142 (MTMR12-001) 32227006-32313009 protein_coding
ENST00000504049 (MTMR12-006) 32243521-32255937 retained_intron
ENST00000505419 (MTMR12-004) 32268701-32312987 nonsense_mediated_decay
ENST00000510216 (MTMR12-007) 32230085-32233893 processed_transcript
ENST00000513622 (MTMR12-005) 32271833-32312924 nonsense_mediated_decay
ENSG00000199731 (RNU6-1079P)
RNA, U6 small nuclear 1079, pseudogene 		ENST00000362861 (RNU6-1079P-201) 32234766-32234875 snRNA
ENSG00000207052 (RNU6-378P)
RNA, U6 small nuclear 378, pseudogene 		ENST00000384324 (RNU6-378P-201) 32309662-32309768 snRNA
ENSG00000207956 (MIR579)
microRNA 579 		ENST00000385221 (MIR579-201) 32394378-32394475 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SV_0001ENSDARG00000027109ENSDART00000074789ENSDART00000129415ENSDART00000130579ENSDART00000134891ENSDART00000136451ENSDARG00000059817ENSDART00000083561CIL_0002SV_0002ENSG00000056097ENST00000265069ENST00000502988ENST00000505204ENST00000505366ENST00000507465ENST00000510369ENST00000514356ENST00000616882ENSG00000150712ENST00000264934ENST00000280285ENST00000382142ENST00000504049ENST00000505419ENST00000510216ENST00000513622ENSG00000199731ENST00000362861ENSG00000207052ENST00000384324ENSG00000207956ENST00000385221
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SV_0001ENSDARG00000027109ENSDART00000074789ENSDART00000129415ENSDART00000134891ENSDARG00000059817ENSDART00000083561CIL_0002SV_0002ENSG00000056097ENST00000265069ENST00000507465ENSG00000150712ENST00000264934ENST00000280285ENST00000382142ENST00000505419ENSG00000199731ENST00000362861ENSG00000207052ENST00000384324ENSG00000207956ENST00000385221
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027109 ENSDART00000074789 N/A N/A N/A 36.919±21.11 N/A N/A 12.817±6.33 2.607±0.00 1.588±0.00 N/A 5.186±0.00 N/A N/A N/A
ENSDART00000129415 N/A N/A N/A N/A N/A N/A N/A N/A 0.827±0.00 N/A 1.684±0.00 N/A N/A N/A
ENSDART00000130579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134891 N/A N/A N/A N/A N/A N/A 25.125±0.05 24.819±3.57 N/A N/A N/A N/A N/A N/A
ENSDART00000136451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059817 ENSDART00000083561 N/A N/A N/A 0.818±0.31 N/A N/A 1.472±1.12 1.782±0.00 0.373±0.00 N/A 1.534±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000056097 ENST00000265069 13.459±0.00 13.703±0.00 5.306±0.00 15.816±10.80 13.592±2.99 12.900±8.18 8.322±5.83 11.769±7.82 8.183±2.83 9.639±0.00 7.467±5.46 13.109±5.39 10.626±0.78 10.140±5.78
ENST00000502988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507465 8.523±0.00 N/A N/A 29.433±0.00 N/A N/A N/A 3.750±0.00 N/A N/A 4.614±0.00 13.521±7.39 15.004±0.00 18.789±3.74
ENST00000510369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150712 ENST00000264934 N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A N/A N/A 0.743±0.00 N/A N/A 3.978±0.00
ENST00000280285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.574±0.00
ENST00000382142 9.617±0.00 2.253±0.00 0.955±0.00 4.028±0.63 7.496±5.49 4.082±0.66 2.129±1.31 3.829±2.00 1.922±0.68 N/A 0.927±0.41 5.227±1.70 3.242±0.24 6.407±0.50
ENST00000504049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.419±0.00 N/A N/A N/A
ENST00000510216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199731 ENST00000362861 N/A 1.495±0.00 N/A N/A N/A 0.520±0.00 N/A N/A N/A N/A N/A N/A N/A 0.166±0.00
ENSG00000207052 ENST00000384324 0.803±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207956 ENST00000385221 N/A N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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