C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000074789 zfr-001 ENSDARG00000027109 7955 - 5:42743318-42761350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000074789
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000074789 36.919±21.11 12.817±6.33 2.607±0.00 1.588±0.00 5.186±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SV CIL_0002SV_0001 CGP 5:42724184-42761350
CIL_0002SE CIL_0002SE_0001 CGP 5:42743318-42769912

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122941 Zfr-001 protein_coding Mus_musculus 0 736
ENSMUST00000147492 Zfr-009 retained_intron Mus_musculus 0 198
ENSMUST00000156752 Zfr-008 protein_coding Mus_musculus 0 405
ENST00000265069 ZFR-001 protein_coding Homo_sapiens 0 652
ENST00000510369 ZFR-005 processed_transcript Homo_sapiens 0 377
ENST00000514356 ZFR-006 retained_intron Homo_sapiens 5e-40 171

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