C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507465 ZFR-004 ENSG00000056097 9606 - 5:32355648-32390317 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyMuscleOvaryPlacentaTestisENST00000507465
Transcript ID Adipose Brain Kidney Muscle Ovary Placenta Testis
ENST00000507465 8.523±0.00 29.433±0.00 3.750±0.00 4.614±0.00 13.521±7.39 15.004±0.00 18.789±3.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SV CIL_0002SV_0002 CGP 5:32226994-32444761
CIL_0002SE CIL_0002SE_0002 CGP 5:32354350-32604079

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000157034 Zfr-002 nonsense_mediated_decay Mus_musculus 0 950
ENSMUST00000122941 Zfr-001 protein_coding Mus_musculus 0 774
ENSMUST00000140787 Zfr-003 processed_transcript Mus_musculus 0 636
ENSMUST00000155054 Zfr-007 nonsense_mediated_decay Mus_musculus 0 595
ENSMUST00000156752 Zfr-008 protein_coding Mus_musculus 0 575

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