C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclic nucleotide gated channel alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436404 CNGA3-002 ENSG00000144191 9606 + 2:98346188-98397344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLungOvaryPlacentaENST00000436404
Transcript ID Adipose Brain Colon Kidney Lung Ovary Placenta
ENST00000436404 0.016±0.00 0.335±0.00 0.094±0.00 0.110±0.00 0.058±0.00 0.017±0.00 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U5 CIL_0002U5_0001 CGP 2:98346155-98594390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005887 IBA integral component of plasma membrane
GO:0006810 TAS transport
GO:0006811 IEA ion transport
GO:0006812 IMP cation transport
GO:0007165 TAS signal transduction
GO:0007601 IEA visual perception
GO:0007603 IBA phototransduction, visible light
GO:0015276 TAS ligand-gated ion channel activity
GO:0016020 IEA membrane
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport
GO:1902495 IDA transmembrane transporter complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027288 Cnga3-201 protein_coding Mus_musculus 0 1786

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