C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002UW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045606-ENSDARG00000097208 CGP 7955 25:31223308-31289294
GeneTranscriptPositionBiotype
ENSDARG00000045606 (alkbh3)
alkB, alkylation repair homolog 3 (E. coli) 		ENSDART00000067057 (alkbh3-001) 31223308-31253150 protein_coding
ENSDART00000123220 (alkbh3-201) 31227670-31253148 protein_coding
ENSDART00000145924 (alkbh3-004) 31223346-31241378 protein_coding
ENSDART00000147327 (alkbh3-002) 31223318-31233757 protein_coding
ENSDART00000148250 (alkbh3-003) 31223367-31233686 protein_coding
ENSDARG00000097208 (C25H11orf96)
chromosome 11 open reading frame 96 		ENSDART00000153622 (C25H11orf96-001) 31288009-31289294 protein_coding
CIL_0002UW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166199-ENSG00000187479 CGP 9606 11:43880811-43944338
GeneTranscriptPositionBiotype
ENSG00000166199 (ALKBH3)
alkB, alkylation repair homolog 3 (E. coli) 		ENST00000302708 (ALKBH3-001) 43880839-43920212 protein_coding
ENST00000524742 (ALKBH3-007) 43880855-43883185 protein_coding
ENST00000527029 (ALKBH3-008) 43880831-43882802 retained_intron
ENST00000529366 (ALKBH3-010) 43882577-43919042 protein_coding
ENST00000529434 (ALKBH3-004) 43918804-43920266 retained_intron
ENST00000530754 (ALKBH3-005) 43883082-43901714 retained_intron
ENST00000530803 (ALKBH3-002) 43880874-43920266 nonsense_mediated_decay
ENST00000532129 (ALKBH3-012) 43889762-43920266 protein_coding
ENST00000532410 (ALKBH3-011) 43883083-43920173 processed_transcript
ENST00000532962 (ALKBH3-003) 43880811-43920010 nonsense_mediated_decay
ENST00000533200 (ALKBH3-009) 43882581-43897700 processed_transcript
ENST00000534171 (ALKBH3-006) 43880850-43901544 nonsense_mediated_decay
ENSG00000213693 (SEC14L1P1)
SEC14-like 1 pseudogene 1 		ENST00000534767 (SEC14L1P1-001) 43897456-43899636 processed_pseudogene
ENSG00000244926 (ALKBH3-AS1)
ALKBH3 antisense RNA 1 		ENST00000499194 (ALKBH3-AS1-001) 43909292-43920926 antisense
ENST00000527960 (ALKBH3-AS1-002) 43912447-43920894 antisense
ENST00000528285 (ALKBH3-AS1-004) 43912262-43920944 antisense
ENST00000534287 (ALKBH3-AS1-003) 43912316-43920859 antisense
ENSG00000244953 (RP11-613D13.8)
 ENST00000501541 (RP11-613D13.8-001) 43943787-43947206 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UW_0001ENSDARG00000045606ENSDART00000067057ENSDART00000123220ENSDART00000145924ENSDART00000147327ENSDART00000148250ENSDARG00000097208ENSDART00000153622CIL_0002UW_0002ENSG00000166199ENST00000302708ENST00000524742ENST00000527029ENST00000529366ENST00000529434ENST00000530754ENST00000530803ENST00000532129ENST00000532410ENST00000532962ENST00000533200ENST00000534171ENSG00000213693ENST00000534767ENSG00000244926ENST00000499194ENST00000527960ENST00000528285ENST00000534287ENSG00000244953ENST00000501541
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UW_0001ENSDARG00000045606ENSDART00000067057ENSDART00000123220ENSDART00000145924ENSDARG00000097208ENSDART00000153622CIL_0002UW_0002ENSG00000166199ENST00000302708ENST00000524742ENST00000527029ENST00000529366ENST00000530754ENST00000532129ENST00000532410ENST00000533200ENST00000534171ENSG00000213693ENST00000534767ENSG00000244926ENST00000499194ENST00000527960ENST00000528285ENST00000534287ENSG00000244953ENST00000501541
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045606 ENSDART00000067057 N/A N/A N/A 3.964±0.25 N/A N/A 2.427±1.78 2.533±0.00 N/A N/A 3.206±0.00 N/A N/A N/A
ENSDART00000123220 N/A N/A N/A 1.715±0.60 N/A N/A 6.519±4.51 4.289±2.27 0.185±0.00 N/A 2.178±0.00 N/A N/A N/A
ENSDART00000145924 N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A
ENSDART00000147327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097208 ENSDART00000153622 N/A N/A N/A 17.362±8.47 N/A N/A 51.211±37.66 9.168±5.08 2.967±0.00 N/A 92.368±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166199 ENST00000302708 2.998±0.00 6.902±0.00 N/A 3.162±0.00 2.996±1.58 1.131±0.01 1.976±0.00 3.097±0.00 2.003±1.24 0.923±0.00 3.673±0.00 5.237±2.49 1.542±0.27 5.743±0.82
ENST00000524742 N/A N/A 1.523±0.00 N/A N/A N/A 0.825±0.00 N/A 1.085±0.00 N/A N/A N/A N/A N/A
ENST00000527029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.677±0.00 N/A N/A N/A
ENST00000529366 1.891±0.00 N/A N/A 2.338±0.00 2.227±0.00 N/A N/A N/A N/A N/A 2.982±0.00 N/A N/A N/A
ENST00000529434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530754 3.968±0.00 N/A 1.412±0.00 5.416±0.00 N/A N/A 0.954±0.00 2.227±0.00 N/A N/A 2.797±0.07 3.525±1.49 2.083±0.29 8.384±2.47
ENST00000530803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532129 3.349±0.00 13.831±0.00 N/A 2.916±0.00 3.635±0.00 1.371±0.00 1.809±0.00 5.476±0.00 4.572±0.00 3.613±0.00 4.456±0.12 10.365±0.70 2.211±0.03 5.885±0.00
ENST00000532410 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.450±0.00 N/A 3.643±0.00 2.543±0.00 6.017±0.00
ENST00000532962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.322±0.00 1.887±0.00 N/A
ENST00000534171 N/A N/A N/A N/A N/A N/A 0.473±0.00 N/A N/A 1.643±0.00 N/A N/A N/A N/A
ENSG00000213693 ENST00000534767 N/A N/A 0.489±0.00 N/A 0.614±0.00 0.929±0.00 0.144±0.00 N/A 0.286±0.00 N/A N/A N/A N/A N/A
ENSG00000244926 ENST00000499194 0.014±0.00 0.051±0.00 0.060±0.00 0.021±0.01 0.040±0.00 0.015±0.00 N/A N/A 0.111±0.00 N/A N/A 0.070±0.04 N/A 1.514±1.17
ENST00000527960 0.065±0.00 0.262±0.00 N/A 0.233±0.11 0.683±0.60 N/A 0.144±0.00 0.442±0.00 0.180±0.00 N/A N/A 0.378±0.20 0.224±0.04 1.144±0.00
ENST00000528285 0.092±0.00 N/A N/A 0.168±0.00 N/A N/A N/A 0.189±0.00 0.063±0.04 0.622±0.00 N/A N/A N/A 4.962±0.00
ENST00000534287 N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244953 ENST00000501541 N/A N/A N/A 1.157±0.00 2.505±0.00 0.178±0.00 N/A N/A 2.273±1.83 N/A N/A 0.795±0.00 N/A N/A

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