C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD nuclear envelope phosphatase 1 regulatory subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127490 Cnep1r1-002 ENSMUSG00000036810 10090 + 8:88118787-88135110 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLungMuscleOvaryPlacentaENSMUST00000127490
Transcript ID Adrenal Breast Colon Heart Lung Muscle Ovary Placenta
ENSMUST00000127490 3.664±0.00 3.000±0.46 2.135±0.00 4.834±0.83 2.722±0.00 4.302±0.97 3.627±1.07 1.576±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080X CIL_00080X_0002 VISTA 8:87535970-88137269
CIL_0002VV CIL_0002VV_0002 CGP 8:87661810-88135110
CIL_00078I CIL_00078I_0002 CGP 8:88118769-88172027

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 ISS cytoplasm
GO:0006629 IEA lipid metabolic process
GO:0010867 ISS positive regulation of triglyceride biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0031965 ISS nuclear membrane
GO:0034504 ISS protein localization to nucleus
GO:0035307 ISS positive regulation of protein dephosphorylation
GO:0071595 ISS Nem1-Spo7 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389134 CNEP1R1-007 nonsense_mediated_decay Homo_sapiens 0 521
ENST00000423374 RP5-1055C14.6-001 processed_pseudogene Homo_sapiens 0 285
ENST00000427478 CNEP1R1-201 protein_coding Homo_sapiens 0 804
ENST00000458059 CNEP1R1-001 protein_coding Homo_sapiens 0 804
ENST00000562576 CNEP1R1-005 protein_coding Homo_sapiens 0 444
ENST00000565457 CNEP1R1-002 nonsense_mediated_decay Homo_sapiens 0 804
ENST00000565556 CNEP1R1-003 protein_coding Homo_sapiens 0 804
ENST00000566093 CNEP1R1-009 protein_coding Homo_sapiens 0 255
ENST00000566482 CNEP1R1-004 nonsense_mediated_decay Homo_sapiens 0 451
ENST00000567712 CNEP1R1-010 processed_transcript Homo_sapiens 1e-18 97
ENST00000568890 CNEP1R1-006 nonsense_mediated_decay Homo_sapiens 0 1000
ENST00000569647 CNEP1R1-008 processed_transcript Homo_sapiens 1e-18 97

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