C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD nuclear envelope phosphatase 1 regulatory subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128290 Cnep1r1-004 ENSMUSG00000036810 10090 + 8:88118800-88134480 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverOvaryTestisENSMUST00000128290
Transcript ID Adipose Adrenal Breast Colon Liver Ovary Testis
ENSMUST00000128290 2.929±0.32 1.241±0.29 2.600±0.00 2.046±0.00 1.288±0.00 1.703±0.68 0.641±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080X CIL_00080X_0002 VISTA 8:87535970-88137269
CIL_0002VV CIL_0002VV_0002 CGP 8:87661810-88135110
CIL_00078I CIL_00078I_0002 CGP 8:88118769-88172027

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389134 CNEP1R1-007 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000423374 RP5-1055C14.6-001 processed_pseudogene Homo_sapiens 0 370
ENST00000427478 CNEP1R1-201 protein_coding Homo_sapiens 0 645
ENST00000458059 CNEP1R1-001 protein_coding Homo_sapiens 0 645
ENST00000562576 CNEP1R1-005 protein_coding Homo_sapiens 0 470
ENST00000565457 CNEP1R1-002 nonsense_mediated_decay Homo_sapiens 0 645
ENST00000565556 CNEP1R1-003 protein_coding Homo_sapiens 0 645
ENST00000566093 CNEP1R1-009 protein_coding Homo_sapiens 0 383
ENST00000566482 CNEP1R1-004 nonsense_mediated_decay Homo_sapiens 0 191
ENST00000567712 CNEP1R1-010 processed_transcript Homo_sapiens 6e-17 92
ENST00000568890 CNEP1R1-006 nonsense_mediated_decay Homo_sapiens 0 645
ENST00000569647 CNEP1R1-008 processed_transcript Homo_sapiens 5e-17 92

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