C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD nuclear envelope phosphatase 1 regulatory subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036810 Cnep1r1 10090 + 8:88118769-88135110 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095214 Cnep1r1-001 88118769-88135106 protein_coding
  ENSMUST00000117775 Cnep1r1-005 88118807-88131070 protein_coding
  ENSMUST00000121097 Cnep1r1-003 88118800-88131687 protein_coding
  ENSMUST00000127490 Cnep1r1-002 88118787-88135110 nonsense_mediated_decay
  ENSMUST00000128290 Cnep1r1-004 88118800-88134480 retained_intron
  ENSMUST00000131891 Cnep1r1-006 88118778-88130854 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095214ENSMUST00000121097ENSMUST00000127490ENSMUST00000128290ENSMUST00000131891
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095214 12.121±3.59 9.119±1.19 16.947±3.00 12.235±5.86 9.025±2.14 8.594±1.38 8.003±0.52 12.731±1.13 12.343±3.95 13.802±1.38 11.864±1.38 7.811±4.57 13.170±6.20 9.232±4.37
ENSMUST00000121097 2.758±0.04 1.064±0.41 2.665±0.31 3.626±0.10 1.190±0.11 1.231±0.26 N/A 1.638±0.16 1.950±0.99 1.819±0.26 N/A 1.929±1.01 2.710±0.54 1.572±0.20
ENSMUST00000127490 N/A 3.664±0.00 N/A N/A 3.000±0.46 2.135±0.00 4.834±0.83 N/A N/A 2.722±0.00 4.302±0.97 3.627±1.07 1.576±0.00 N/A
ENSMUST00000128290 2.929±0.32 1.241±0.29 N/A N/A 2.600±0.00 2.046±0.00 N/A N/A 1.288±0.00 N/A N/A 1.703±0.68 N/A 0.641±0.00
ENSMUST00000131891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.270±0.00 8.486±0.57 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080X CIL_00080X_0002 VISTA 8:87535970-88137269
CIL_0002VV CIL_0002VV_0002 CGP 8:87661810-88135110
CIL_00078I CIL_00078I_0002 CGP 8:88118769-88172027

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0006629 IEA lipid metabolic process
GO:0010867 ISS positive regulation of triglyceride biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0031965 ISS nuclear membrane
GO:0034504 ISS protein localization to nucleus
GO:0035307 ISS positive regulation of protein dephosphorylation
GO:0071595 ISS Nem1-Spo7 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036064 cnep1r1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein_coding Danio_rerio
ENSG00000205423 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 protein_coding Homo_sapiens

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