C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD209 molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315599 CD209-001 ENSG00000090659 9606 - 19:7739994-7747534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverLungOvaryPlacentaTestisENST00000315599
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000315599 3.566±0.00 13.458±0.00 0.078±0.00 1.542±1.03 1.908±0.00 1.173±0.43 0.876±0.37 0.748±0.17 0.907±0.00 3.088±1.05 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VX CIL_0002VX_0001 CGP 19:7739994-7769605

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005537 TAS mannose binding
GO:0005737 NAS cytoplasm
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0007157 TAS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 NAS leukocyte cell-cell adhesion
GO:0009986 IDA cell surface
GO:0009988 TAS cell-cell recognition
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0019048 TAS modulation by virus of host morphology or physiology
GO:0019062 TAS virion attachment to host cell
GO:0019079 NAS viral genome replication
GO:0019882 NAS antigen processing and presentation
GO:0030246 NAS carbohydrate binding
GO:0035556 NAS intracellular signal transduction
GO:0042129 IDA regulation of T cell proliferation
GO:0042605 NAS peptide antigen binding
GO:0045087 IEA innate immune response
GO:0046790 TAS virion binding
GO:0046872 IEA metal ion binding
GO:0046968 NAS peptide antigen transport
GO:0070062 IDA extracellular vesicular exosome
GO:0075733 TAS intracellular transport of virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112289 Zrsr2-001 protein_coding Mus_musculus 0 440
ENSMUST00000132350 Zrsr2-008 retained_intron Mus_musculus 0 270
ENSMUST00000049506 Zrsr1-001 protein_coding Mus_musculus 0 263
ENSMUST00000057843 Commd1-001 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000124719 Zrsr2-006 retained_intron Mus_musculus 2e-40 172

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