C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002X6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070526-ENSG00000182534 CGP 9606 17:76624761-76711016
GeneTranscriptPositionBiotype
ENSG00000070526 (ST6GALNAC1)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 		ENST00000156626 (ST6GALNAC1-001) 76624763-76643838 protein_coding
ENST00000359088 (ST6GALNAC1-002) 76624763-76643693 nonsense_mediated_decay
ENST00000585633 (ST6GALNAC1-008) 76625125-76626391 nonsense_mediated_decay
ENST00000588375 (ST6GALNAC1-009) 76625648-76627112 retained_intron
ENST00000589004 (ST6GALNAC1-011) 76626006-76629234 processed_transcript
ENST00000589813 (ST6GALNAC1-005) 76629395-76643660 nonsense_mediated_decay
ENST00000589992 (ST6GALNAC1-006) 76637471-76643660 protein_coding
ENST00000590784 (ST6GALNAC1-010) 76625850-76627167 protein_coding
ENST00000590878 (ST6GALNAC1-003) 76627098-76643774 processed_transcript
ENST00000590915 (ST6GALNAC1-007) 76633595-76643757 processed_transcript
ENST00000592042 (ST6GALNAC1-004) 76624761-76643786 nonsense_mediated_decay
ENSG00000182534 (MXRA7)
matrix-remodelling associated 7 		ENST00000355797 (MXRA7-007) 76672551-76710955 protein_coding
ENST00000375036 (MXRA7-004) 76679569-76711004 protein_coding
ENST00000449428 (MXRA7-001) 76679569-76711016 protein_coding
ENST00000585519 (MXRA7-006) 76680534-76688705 protein_coding
ENST00000588114 (MXRA7-003) 76680617-76709597 protein_coding
ENST00000589082 (MXRA7-005) 76680777-76688887 protein_coding
ENST00000592148 (MXRA7-002) 76679571-76690219 protein_coding
ENSG00000212418 (RNY4P36)
RNA, Ro-associated Y4 pseudogene 36 		ENST00000391116 (RNY4P36-201) 76703632-76703727 misc_RNA
ENSG00000277382 (RP11-318A15.8)
 ENST00000612163 (RP11-318A15.8-001) 76709760-76710045 antisense
CIL_0002X6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009588-ENSMUSG00000020814 CGP 10090 11:116765025-116828046
GeneTranscriptPositionBiotype
ENSMUSG00000009588 (St6galnac1)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 		ENSMUST00000009732 (St6galnac1-001) 116765025-116775507 protein_coding
ENSMUSG00000020814 (Mxra7)
matrix-remodelling associated 7 		ENSMUST00000021170 (Mxra7-001) 116803062-116828046 protein_coding
ENSMUST00000047715 (Mxra7-002) 116807729-116828013 protein_coding
ENSMUST00000150015 (Mxra7-003) 116807913-116828003 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002X6_0001ENSG00000070526ENST00000156626ENST00000359088ENST00000585633ENST00000588375ENST00000589004ENST00000589813ENST00000589992ENST00000590784ENST00000590878ENST00000590915ENST00000592042ENSG00000182534ENST00000355797ENST00000375036ENST00000449428ENST00000585519ENST00000588114ENST00000589082ENST00000592148ENSG00000212418ENST00000391116ENSG00000277382ENST00000612163CIL_0002X6_0002ENSMUSG00000009588ENSMUST00000009732ENSMUSG00000020814ENSMUST00000021170ENSMUST00000047715ENSMUST00000150015
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002X6_0001ENSG00000070526ENST00000156626ENST00000359088ENST00000585633ENST00000589004ENST00000589813ENST00000590784ENST00000590878ENST00000590915ENST00000592042ENSG00000182534ENST00000355797ENST00000375036ENST00000449428ENST00000585519ENSG00000212418ENST00000391116ENSG00000277382ENST00000612163CIL_0002X6_0002ENSMUSG00000009588ENSMUST00000009732ENSMUSG00000020814ENSMUST00000021170ENSMUST00000047715ENSMUST00000150015
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070526 ENST00000156626 N/A N/A N/A N/A 5.381±0.00 12.454±0.00 N/A N/A N/A N/A N/A 1.264±0.51 2.251±1.23 1.212±0.00
ENST00000359088 0.332±0.00 0.307±0.00 N/A 0.478±0.00 0.748±0.00 6.531±0.00 0.232±0.20 N/A N/A 4.152±0.00 N/A 1.768±1.25 1.701±1.49 0.700±0.32
ENST00000585633 0.595±0.00 N/A N/A 0.731±0.00 N/A 13.657±0.00 0.950±0.00 0.072±0.00 0.214±0.00 N/A 0.515±0.00 6.640±0.00 2.343±0.00 1.708±0.00
ENST00000588375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589004 N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A
ENST00000589813 N/A N/A N/A 0.929±0.00 N/A N/A 0.330±0.00 N/A N/A N/A 0.500±0.00 N/A N/A N/A
ENST00000589992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.769±0.00 2.313±0.00 3.698±0.00
ENST00000590878 N/A 0.504±0.00 N/A 0.206±0.00 N/A N/A 0.113±0.00 0.207±0.00 0.154±0.00 N/A N/A N/A 0.628±0.00 0.564±0.00
ENST00000590915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.310±0.00 N/A N/A N/A
ENST00000592042 0.286±0.00 N/A N/A 0.365±0.00 0.351±0.00 3.291±0.00 N/A N/A N/A 1.020±0.00 N/A 0.628±0.27 0.241±0.00 0.828±0.00
ENSG00000182534 ENST00000355797 9.693±0.00 13.656±0.00 0.625±0.00 4.055±2.25 8.120±5.54 9.302±7.58 3.730±2.49 3.004±0.00 1.119±0.00 4.435±3.32 1.039±0.15 5.835±4.49 10.831±2.69 12.150±6.50
ENST00000375036 35.053±0.00 N/A 0.955±0.00 27.332±20.52 41.931±0.00 N/A 25.727±16.39 5.056±3.48 N/A 14.326±0.00 N/A 10.292±6.76 21.877±8.67 21.556±0.00
ENST00000449428 63.842±0.00 64.235±0.00 3.361±0.00 2.786±0.00 27.335±11.09 70.788±62.59 38.111±34.65 15.495±12.54 24.949±16.88 57.041±47.41 12.319±9.51 54.552±53.37 108.413±44.76 85.917±63.69
ENST00000585519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.768±0.00 8.883±0.00 N/A N/A
ENST00000588114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212418 ENST00000391116 0.614±0.00 0.396±0.00 N/A N/A N/A 0.178±0.00 0.570±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000277382 ENST00000612163 0.174±0.00 N/A N/A 0.341±0.00 0.208±0.00 0.635±0.00 0.824±0.36 0.100±0.00 N/A N/A N/A 0.231±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009588 ENSMUST00000009732 0.079±0.04 0.149±0.08 0.007±0.00 0.009±0.00 0.277±0.09 3.581±1.39 0.069±0.00 0.222±0.14 0.011±0.01 0.094±0.02 N/A 0.078±0.04 0.014±0.01 0.093±0.05
ENSMUSG00000020814 ENSMUST00000021170 6.734±0.88 14.501±2.64 11.650±2.68 3.942±1.62 7.398±1.41 8.004±1.05 5.087±0.55 3.874±0.63 0.975±0.36 16.777±3.37 1.845±0.38 13.873±3.72 1.852±0.49 1.513±0.18
ENSMUST00000047715 N/A 119.102±14.98 N/A 1.749±0.00 41.775±4.90 24.238±6.33 N/A 1.859±0.00 0.997±0.42 95.006±0.00 N/A 42.590±19.20 N/A 1.563±0.50
ENSMUST00000150015 N/A 224.764±69.18 N/A 9.910±6.57 N/A N/A 4.630±0.00 5.373±1.27 0.868±0.00 33.464±11.02 N/A 49.731±0.00 6.445±3.16 5.759±3.95

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