C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000156626 ST6GALNAC1-001 ENSG00000070526 9606 - 17:76624763-76643838 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryPlacentaTestisENST00000156626
Transcript ID Breast Colon Ovary Placenta Testis
ENST00000156626 5.381±0.00 12.454±0.00 1.264±0.51 2.251±1.23 1.212±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000194 CIL_000194_0001 CGP 17:76563710-76643838
CIL_0002X6 CIL_0002X6_0001 CGP 17:76624761-76711016

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001665 IEA alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008373 NAS:IEA sialyltransferase activity
GO:0009312 IEA oligosaccharide biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009732 St6galnac1-001 protein_coding Mus_musculus 0 961
ENSMUST00000106377 Gm11735-001 unprocessed_pseudogene Mus_musculus 0 950

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