C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002XV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156239-ENSG00000198862 CGP 9606 21:28872191-28992956
GeneTranscriptPositionBiotype
ENSG00000156239 (N6AMT1)
N-6 adenine-specific DNA methyltransferase 1 (putative) 		ENST00000303775 (N6AMT1-001) 28872191-28885371 protein_coding
ENST00000351429 (N6AMT1-002) 28872191-28885371 protein_coding
ENST00000460212 (N6AMT1-003) 28872191-28885371 nonsense_mediated_decay
ENSG00000198862 (LTN1)
listerin E3 ubiquitin protein ligase 1 		ENST00000361371 (LTN1-008) 28928144-28992885 protein_coding
ENST00000389194 (LTN1-001) 28928144-28992949 protein_coding
ENST00000389195 (LTN1-002) 28961317-28992949 protein_coding
ENST00000475344 (LTN1-005) 28958450-28960821 retained_intron
ENST00000483326 (LTN1-004) 28966895-28986761 nonsense_mediated_decay
ENST00000486427 (LTN1-006) 28958406-28959862 retained_intron
ENST00000614971 (LTN1-201) 28928144-28992956 protein_coding
ENSG00000215005 (HSPD1P7)
heat shock 60kDa protein 1 (chaperonin) pseudogene 7 		ENST00000447985 (HSPD1P7-001) 28887280-28889272 processed_pseudogene
ENSG00000215317 (THUMPD1P1)
THUMP domain containing 1 pseudogene 1 		ENST00000400014 (THUMPD1P1-001) 28901779-28903697 processed_pseudogene
CIL_0002XV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044442-ENSMUSG00000052299 CGP 10090 16:87354185-87432606
GeneTranscriptPositionBiotype
ENSMUSG00000044442 (N6amt1)
N-6 adenine-specific DNA methyltransferase 1 (putative) 		ENSMUST00000054442 (N6amt1-001) 87354185-87368742 protein_coding
ENSMUST00000118115 (N6amt1-002) 87354245-87367685 protein_coding
ENSMUST00000118310 (N6amt1-004) 87354227-87368742 protein_coding
ENSMUST00000120284 (N6amt1-003) 87354243-87365670 protein_coding
ENSMUSG00000052299 (Ltn1)
listerin E3 ubiquitin protein ligase 1 		ENSMUST00000039449 (Ltn1-201) 87376651-87432606 protein_coding
ENSMUSG00000065647 (Gm25896)
predicted gene, 25896 		ENSMUST00000083713 (Gm25896-201) 87418909-87419044 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XV_0001ENSG00000156239ENST00000303775ENST00000351429ENST00000460212ENSG00000198862ENST00000361371ENST00000389194ENST00000389195ENST00000475344ENST00000483326ENST00000486427ENST00000614971ENSG00000215005ENST00000447985ENSG00000215317ENST00000400014CIL_0002XV_0002ENSMUSG00000044442ENSMUST00000054442ENSMUST00000118115ENSMUST00000118310ENSMUST00000120284ENSMUSG00000052299ENSMUST00000039449ENSMUSG00000065647ENSMUST00000083713
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XV_0001ENSG00000156239ENST00000303775ENST00000351429ENST00000460212ENSG00000198862ENST00000361371ENST00000389194ENST00000389195ENST00000483326ENST00000614971ENSG00000215005ENST00000447985ENSG00000215317ENST00000400014CIL_0002XV_0002ENSMUSG00000044442ENSMUST00000054442ENSMUST00000118115ENSMUST00000118310ENSMUST00000120284ENSMUSG00000052299ENSMUST00000039449ENSMUSG00000065647ENSMUST00000083713
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156239 ENST00000303775 0.154±0.00 0.525±0.00 0.116±0.00 N/A 0.488±0.00 1.136±0.00 0.680±0.00 0.534±0.31 0.428±0.00 N/A 0.178±0.00 1.097±0.00 0.810±0.15 0.286±0.00
ENST00000351429 0.366±0.00 N/A 0.616±0.00 1.111±0.31 0.549±0.34 1.839±0.00 0.506±0.00 1.648±0.00 N/A 1.064±0.66 0.422±0.00 0.982±0.30 1.287±0.45 1.515±0.15
ENST00000460212 0.866±0.00 0.457±0.00 0.338±0.00 0.450±0.00 1.368±0.10 1.123±0.00 1.533±0.00 1.763±0.00 0.402±0.00 0.510±0.00 0.338±0.10 1.378±0.94 1.631±0.39 1.267±0.00
ENSG00000198862 ENST00000361371 2.305±0.00 0.413±0.00 1.577±0.00 3.063±1.14 2.374±0.83 1.226±0.01 2.050±0.02 2.007±0.84 2.847±2.42 2.024±1.05 1.860±1.15 2.103±2.51 0.765±0.23 N/A
ENST00000389194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.202±0.00
ENST00000389195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.776±0.00 N/A N/A 1.471±0.00
ENST00000475344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483326 N/A N/A 2.093±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.567±0.98
ENSG00000215005 ENST00000447985 N/A 0.045±0.00 N/A 0.006±0.00 0.006±0.00 0.006±0.00 N/A 0.044±0.00 0.011±0.00 N/A N/A 0.021±0.00 0.021±0.00 0.010±0.00
ENSG00000215317 ENST00000400014 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A 0.033±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044442 ENSMUST00000054442 5.364±1.04 2.437±0.68 7.487±1.32 2.037±0.54 3.075±0.59 2.243±0.44 4.678±0.42 6.970±0.68 2.545±0.76 2.594±0.80 3.511±0.49 6.373±2.20 3.957±2.11 1.003±0.30
ENSMUST00000118115 N/A N/A 1.407±0.11 0.991±0.12 0.948±0.30 1.195±0.33 N/A 1.041±0.00 0.472±0.01 0.897±0.16 N/A 2.974±0.72 N/A N/A
ENSMUST00000118310 2.020±0.00 3.962±1.33 1.517±0.08 1.483±0.59 2.061±0.00 2.203±0.68 1.549±0.00 1.769±0.20 1.368±0.47 2.879±0.57 N/A 1.514±0.61 1.180±0.54 0.722±0.55
ENSMUST00000120284 0.963±0.44 1.510±0.43 1.136±0.05 1.265±0.51 0.845±0.15 1.317±0.15 0.498±0.17 1.031±0.27 0.633±0.21 0.804±0.08 0.337±0.01 4.120±1.72 0.416±0.17 0.356±0.13
ENSMUSG00000052299 ENSMUST00000039449 5.424±1.58 2.142±0.87 3.280±2.21 5.221±0.57 2.814±1.12 1.530±0.42 1.757±0.27 3.664±0.87 2.178±0.94 3.262±0.13 3.014±0.83 3.855±2.10 4.758±2.23 4.980±2.79
ENSMUSG00000065647 ENSMUST00000083713 N/A N/A N/A N/A N/A N/A N/A N/A 3.936±0.00 N/A N/A N/A N/A N/A

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