C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 60kDa protein 1 (chaperonin) pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447985 HSPD1P7-001 ENSG00000215005 9606 - 21:28887280-28889272 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000447985
Transcript ID Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000447985 0.045±0.00 0.006±0.00 0.006±0.00 0.006±0.00 0.044±0.00 0.011±0.00 0.021±0.00 0.021±0.00 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XV CIL_0002XV_0001 CGP 21:28872191-28992956

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 1541
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 1530
ENSMUST00000121815 Gm12725-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000189810 RP24-292D18.1-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000122013 Gm12608-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 619
ENSMUST00000120603 Gm14465-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000144077 Hspd1-003 protein_coding Mus_musculus 0 390
ENSMUST00000118299 Gm12667-001 processed_pseudogene Mus_musculus 1e-38 165

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