C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002ZA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088970-ENSG00000088930 CGP 9606 20:21125983-21389827
GeneTranscriptPositionBiotype
ENSG00000088930 (XRN2)
5'-3' exoribonuclease 2
ENST00000377191 (XRN2-001) 21303304-21389827 protein_coding
ENSG00000199509 (RNA5SP477)
RNA, 5S ribosomal pseudogene 477
ENST00000362639 (RNA5SP477-201) 21138956-21139074 rRNA
ENSG00000214535 (RPS15AP1)
ribosomal protein S15a pseudogene 1
ENST00000457423 (RPS15AP1-001) 21166206-21166596 processed_pseudogene
CIL_0002ZA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074749-ENSMUSG00000027433 CGP 10090 2:146855864-147078000
GeneTranscriptPositionBiotype
ENSMUSG00000027433 (Xrn2)
5'-3' exoribonuclease 2
ENSMUST00000028921 (Xrn2-001) 147012996-147078000 protein_coding
ENSMUST00000136136 (Xrn2-003) 147042546-147047822 retained_intron
ENSMUST00000137358 (Xrn2-004) 147061440-147068900 retained_intron
ENSMUST00000147057 (Xrn2-002) 147029552-147038287 retained_intron
ENSMUSG00000074749 (Kiz)
kizuna centrosomal protein
ENSMUST00000099278 (Kiz-001) 146855864-146970097 protein_coding
ENSMUST00000135595 (Kiz-003) 146952883-146970092 retained_intron
ENSMUST00000156232 (Kiz-002) 146855909-146889295 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZA_0001ENSG00000088930ENST00000377191ENSG00000199509ENST00000362639ENSG00000214535ENST00000457423CIL_0002ZA_0002ENSMUSG00000027433ENSMUST00000028921ENSMUST00000136136ENSMUST00000137358ENSMUST00000147057ENSMUSG00000074749ENSMUST00000099278ENSMUST00000135595ENSMUST00000156232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZA_0001ENSG00000088930ENST00000377191ENSG00000199509ENST00000362639ENSG00000214535ENST00000457423CIL_0002ZA_0002ENSMUSG00000027433ENSMUST00000028921ENSMUST00000137358ENSMUST00000147057ENSMUSG00000074749ENSMUST00000099278ENSMUST00000156232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088930 ENST00000377191 17.612±0.00 15.565±0.00 1.532±0.00 3.453±1.28 10.045±1.85 8.251±3.12 6.860±3.72 11.647±4.07 6.414±0.81 7.453±4.14 8.171±7.57 14.247±6.28 16.650±3.03 21.002±0.33
ENSG00000199509 ENST00000362639 N/A 0.224±0.00 N/A 0.489±0.00 0.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.828±0.00
ENSG00000214535 ENST00000457423 0.117±0.00 0.167±0.00 0.218±0.00 0.124±0.04 1.728±0.00 0.156±0.00 0.158±0.06 0.252±0.00 0.259±0.00 0.280±0.00 1.099±0.00 0.854±0.98 0.450±0.33 0.313±0.20
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027433 ENSMUST00000028921 7.458±1.98 2.801±0.86 15.858±1.63 15.664±7.48 6.124±1.54 4.581±1.08 3.538±0.48 5.883±0.50 9.748±5.82 7.628±1.32 3.628±0.22 11.268±10.52 18.332±6.88 11.947±1.87
ENSMUST00000136136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137358 N/A 3.904±0.29 N/A N/A N/A 8.000±1.18 N/A N/A 7.306±0.00 N/A N/A N/A N/A N/A
ENSMUST00000147057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.492±0.00 43.586±0.00 50.204±0.00
ENSMUSG00000074749 ENSMUST00000099278 2.718±0.50 1.273±0.57 8.198±0.69 5.120±1.26 3.949±0.74 2.072±0.61 8.538±0.76 4.812±0.78 3.344±0.90 5.166±0.57 7.943±0.62 5.651±5.51 3.408±1.34 60.870±18.49
ENSMUST00000135595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156232 N/A 1.500±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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