C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002ZP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075853-ENSDARG00000013310 CGP 7955 24:26590920-26785364
GeneTranscriptPositionBiotype
ENSDARG00000013310 (MAP3K15)
mitogen-activated protein kinase kinase kinase 15 		ENSDART00000006615 (MAP3K15-201) 26709862-26785364 protein_coding
ENSDART00000143099 (MAP3K15-001) 26709764-26783585 protein_coding
ENSDARG00000075853 (sh3kbp1)
SH3-domain kinase binding protein 1 		ENSDART00000109809 (sh3kbp1-201) 26591223-26699913 protein_coding
ENSDART00000143395 (sh3kbp1-001) 26590920-26699619 protein_coding
CIL_0002ZP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040990-ENSMUSG00000031303 CGP 10090 X:159627272-160123351
GeneTranscriptPositionBiotype
ENSMUSG00000031299 (Pdha1)
pyruvate dehydrogenase E1 alpha 1 		ENSMUST00000033662 (Pdha1-001) 160122209-160138413 protein_coding
ENSMUST00000126440 (Pdha1-004) 160129288-160138309 retained_intron
ENSMUST00000127535 (Pdha1-002) 160136897-160138356 processed_transcript
ENSMUST00000156531 (Pdha1-005) 160127291-160128965 retained_intron
ENSMUSG00000031303 (Map3k15)
mitogen-activated protein kinase kinase kinase 15 		ENSMUST00000033665 (Map3k15-001) 159988433-160123351 protein_coding
ENSMUSG00000040990 (Sh3kbp1)
SH3-domain kinase binding protein 1 		ENSMUST00000073094 (Sh3kbp1-004) 159627541-159973169 protein_coding
ENSMUST00000080394 (Sh3kbp1-002) 159708601-159974167 protein_coding
ENSMUST00000112447 (Sh3kbp1-006) 159840964-159975916 processed_transcript
ENSMUST00000112451 (Sh3kbp1-007) 159840468-159975664 protein_coding
ENSMUST00000112453 (Sh3kbp1-008) 159840481-159974167 protein_coding
ENSMUST00000112456 (Sh3kbp1-001) 159627272-159978069 protein_coding
ENSMUST00000123433 (Sh3kbp1-012) 159697316-159865400 protein_coding
ENSMUST00000128185 (Sh3kbp1-009) 159942693-159975917 processed_transcript
ENSMUST00000130987 (Sh3kbp1-014) 159943018-159973190 processed_transcript
ENSMUST00000134062 (Sh3kbp1-011) 159941697-159971888 processed_transcript
ENSMUST00000141354 (Sh3kbp1-003) 159708601-159973865 nonsense_mediated_decay
ENSMUST00000142426 (Sh3kbp1-010) 159942912-159974167 processed_transcript
ENSMUST00000150433 (Sh3kbp1-005) 159627541-159921085 retained_intron
ENSMUST00000152426 (Sh3kbp1-013) 159919859-159973319 protein_coding
ENSMUSG00000082810 (Gm8682)
predicted gene 8682 		ENSMUST00000121310 (Gm8682-001) 160036321-160036818 processed_pseudogene
ENSMUSG00000083393 (Gm15194)
predicted gene 15194 		ENSMUST00000120453 (Gm15194-001) 160020290-160020723 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZP_0001ENSDARG00000013310ENSDART00000006615ENSDART00000143099ENSDARG00000075853ENSDART00000109809ENSDART00000143395CIL_0002ZP_0002ENSMUSG00000031299ENSMUST00000033662ENSMUST00000126440ENSMUST00000127535ENSMUST00000156531ENSMUSG00000031303ENSMUST00000033665ENSMUSG00000040990ENSMUST00000073094ENSMUST00000080394ENSMUST00000112447ENSMUST00000112451ENSMUST00000112453ENSMUST00000112456ENSMUST00000123433ENSMUST00000128185ENSMUST00000130987ENSMUST00000134062ENSMUST00000141354ENSMUST00000142426ENSMUST00000150433ENSMUST00000152426ENSMUSG00000082810ENSMUST00000121310ENSMUSG00000083393ENSMUST00000120453
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZP_0001ENSDARG00000013310ENSDART00000006615ENSDARG00000075853ENSDART00000109809ENSDART00000143395CIL_0002ZP_0002ENSMUSG00000031299ENSMUST00000033662ENSMUSG00000031303ENSMUST00000033665ENSMUSG00000040990ENSMUST00000073094ENSMUST00000080394ENSMUST00000112451ENSMUST00000112453ENSMUST00000112456ENSMUST00000128185ENSMUST00000130987ENSMUST00000134062ENSMUST00000141354ENSMUST00000142426ENSMUST00000152426ENSMUSG00000082810ENSMUST00000121310ENSMUSG00000083393ENSMUST00000120453
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013310 ENSDART00000006615 N/A N/A N/A 0.946±0.46 N/A N/A 8.778±5.46 2.149±0.81 0.043±0.00 N/A 0.965±0.00 N/A N/A N/A
ENSDART00000143099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075853 ENSDART00000109809 N/A N/A N/A 8.222±1.14 N/A N/A 2.956±1.42 5.762±2.36 0.523±0.00 N/A 2.679±0.00 N/A N/A N/A
ENSDART00000143395 N/A N/A N/A 1.737±0.00 N/A N/A 2.251±0.01 1.774±0.00 0.128±0.00 N/A 1.128±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031299 ENSMUST00000033662 95.622±2.72 69.868±15.46 75.474±4.55 37.083±14.07 112.965±4.54 46.866±4.19 212.001±9.19 124.605±14.06 24.850±3.43 40.208±4.27 198.692±9.62 30.579±7.67 42.771±5.54 2.027±0.68
ENSMUST00000126440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031303 ENSMUST00000033665 N/A N/A N/A N/A N/A N/A N/A 7.758±0.18 N/A N/A N/A N/A N/A 0.410±0.13
ENSMUSG00000040990 ENSMUST00000073094 3.565±0.92 N/A N/A 11.394±0.00 3.053±0.00 N/A N/A 0.709±0.04 0.684±0.37 N/A N/A 4.718±2.29 4.309±0.16 N/A
ENSMUST00000080394 4.288±0.10 N/A 6.951±2.06 3.316±0.00 6.565±2.72 N/A N/A 2.094±0.89 1.941±0.91 N/A 0.770±0.00 6.347±2.68 4.984±3.85 N/A
ENSMUST00000112447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112451 N/A N/A 3.502±0.25 3.824±0.66 N/A N/A N/A N/A 0.546±0.01 N/A 0.620±0.05 2.986±0.45 1.087±0.13 N/A
ENSMUST00000112453 4.242±0.63 N/A N/A N/A 5.540±0.82 2.151±0.79 N/A 1.661±0.81 0.181±0.03 4.457±0.94 N/A 4.565±0.70 N/A N/A
ENSMUST00000112456 2.931±0.72 3.244±1.61 N/A 1.990±0.00 9.011±7.29 2.717±0.93 N/A 0.741±0.07 0.360±0.24 4.003±1.17 N/A 5.331±2.55 N/A N/A
ENSMUST00000123433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128185 N/A N/A N/A N/A N/A N/A 6.031±1.45 N/A N/A N/A 1.306±0.38 N/A N/A 1.993±0.03
ENSMUST00000130987 N/A N/A N/A N/A N/A N/A 36.248±2.30 N/A N/A N/A N/A N/A 11.518±1.27 19.815±0.00
ENSMUST00000134062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.550±11.10
ENSMUST00000141354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.600±0.00 2.108±0.24 N/A
ENSMUST00000142426 N/A N/A 5.277±0.47 N/A 12.001±0.13 N/A 15.153±4.51 N/A 0.396±0.00 N/A 3.920±0.74 N/A 4.570±1.04 N/A
ENSMUST00000150433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152426 N/A N/A N/A N/A N/A N/A N/A N/A 0.387±0.00 N/A N/A N/A 7.223±0.00 N/A
ENSMUSG00000082810 ENSMUST00000121310 N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000083393 ENSMUST00000120453 N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A

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