C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3-domain kinase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141354 Sh3kbp1-003 ENSMUSG00000040990 10090 + X:159708601-159973865 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000141354
Transcript ID Ovary Placenta
ENSMUST00000141354 2.600±0.00 2.108±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZP CIL_0002ZP_0002 CGP X:159627272-160123351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005911 IDA cell-cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379697 SH3KBP1-002 protein_coding Homo_sapiens 0 1086
ENST00000379698 SH3KBP1-003 protein_coding Homo_sapiens 0 1777
ENST00000379716 SH3KBP1-008 protein_coding Homo_sapiens 0 1155
ENST00000379726 SH3KBP1-004 protein_coding Homo_sapiens 0 1190
ENST00000397821 SH3KBP1-001 protein_coding Homo_sapiens 0 1683
ENST00000431164 SH3KBP1-006 protein_coding Homo_sapiens 0 641
ENST00000432234 SH3KBP1-005 protein_coding Homo_sapiens 0 835
ENST00000477102 SH3KBP1-007 processed_transcript Homo_sapiens 0 411
ENST00000494961 SH3KBP1-009 processed_transcript Homo_sapiens 0 676

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