C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain kinase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112453 Sh3kbp1-008 ENSMUSG00000040990 10090 + X:159840481-159974167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungOvaryENSMUST00000112453
Transcript ID Adipose Breast Colon Kidney Liver Lung Ovary
ENSMUST00000112453 4.242±0.63 5.540±0.82 2.151±0.79 1.661±0.81 0.181±0.03 4.457±0.94 4.565±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZP CIL_0002ZP_0002 CGP X:159627272-160123351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005856 IEA cytoskeleton
GO:0005911 IDA cell-cell junction
GO:0006897 IEA endocytosis
GO:0006915 IEA apoptotic process
GO:0007010 ISS cytoskeleton organization
GO:0008360 ISS regulation of cell shape
GO:0016020 IEA membrane
GO:0016477 ISS cell migration
GO:0017124 IEA SH3 domain binding
GO:0031410 IEA cytoplasmic vesicle
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379697 SH3KBP1-002 protein_coding Homo_sapiens 0 806
ENST00000379698 SH3KBP1-003 protein_coding Homo_sapiens 0 2409
ENST00000379716 SH3KBP1-008 protein_coding Homo_sapiens 0 2689
ENST00000379726 SH3KBP1-004 protein_coding Homo_sapiens 0 1642
ENST00000397821 SH3KBP1-001 protein_coding Homo_sapiens 0 2691
ENST00000477102 SH3KBP1-007 processed_transcript Homo_sapiens 0 407
ENST00000494961 SH3KBP1-009 processed_transcript Homo_sapiens 0 676

Loading