C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain kinase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112456 Sh3kbp1-001 ENSMUSG00000040990 10090 + X:159627272-159978069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryENSMUST00000112456
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary
ENSMUST00000112456 2.931±0.72 3.244±1.61 1.990±0.00 9.011±7.29 2.717±0.93 0.741±0.07 0.360±0.24 4.003±1.17 5.331±2.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZP CIL_0002ZP_0002 CGP X:159627272-160123351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005856 IEA cytoskeleton
GO:0005911 IDA cell-cell junction
GO:0006897 IEA endocytosis
GO:0006915 IEA apoptotic process
GO:0007010 ISS cytoskeleton organization
GO:0008360 ISS regulation of cell shape
GO:0016020 IEA membrane
GO:0016477 ISS cell migration
GO:0017124 IEA SH3 domain binding
GO:0031410 IEA cytoplasmic vesicle
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379697 SH3KBP1-002 protein_coding Homo_sapiens 0 1086
ENST00000379698 SH3KBP1-003 protein_coding Homo_sapiens 0 3182
ENST00000379716 SH3KBP1-008 protein_coding Homo_sapiens 0 2748
ENST00000379726 SH3KBP1-004 protein_coding Homo_sapiens 0 1923
ENST00000397821 SH3KBP1-001 protein_coding Homo_sapiens 0 4109
ENST00000431164 SH3KBP1-006 protein_coding Homo_sapiens 0 641
ENST00000432234 SH3KBP1-005 protein_coding Homo_sapiens 0 835
ENST00000477102 SH3KBP1-007 processed_transcript Homo_sapiens 0 411
ENST00000494961 SH3KBP1-009 processed_transcript Homo_sapiens 0 676

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