C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00030L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013732-ENSDARG00000054137 CGP 7955 20:37325307-37494828
GeneTranscriptPositionBiotype
ENSDARG00000013732 (vta1)
Vps20-associated 1 homolog (S. cerevisiae) 		ENSDART00000067053 (vta1-001) 37325307-37401268 protein_coding
ENSDARG00000096675 (si:ch211-202p1.4)
si:ch211-202p1.4 		ENSDART00000152841 (si:ch211-202p1.4-001) 37400522-37454024 antisense
CIL_00030L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000009844-ENSG00000112414 CGP 9606 6:142147162-142446266
GeneTranscriptPositionBiotype
ENSG00000009844 (VTA1)
vesicle (multivesicular body) trafficking 1 		ENST00000367621 (VTA1-002) 142147257-142219067 protein_coding
ENST00000367630 (VTA1-001) 142147230-142224689 protein_coding
ENST00000452973 (VTA1-201) 142147162-142220946 protein_coding
ENST00000491881 (VTA1-003) 142170346-142198781 processed_transcript
ENST00000620996 (VTA1-202) 142147162-142220946 protein_coding
ENSG00000112414 (GPR126)
G protein-coupled receptor 126 		ENST00000230173 (GPR126-001) 142301854-142446266 protein_coding
ENST00000296932 (GPR126-008) 142301929-142446248 protein_coding
ENST00000367608 (GPR126-003) 142301859-142446254 protein_coding
ENST00000367609 (GPR126-009) 142301929-142446248 protein_coding
ENST00000415128 (GPR126-010) 142301950-142370954 retained_intron
ENST00000435011 (GPR126-005) 142302626-142367890 protein_coding
ENST00000463637 (GPR126-002) 142402778-142404246 retained_intron
ENST00000472054 (GPR126-014) 142417109-142443783 retained_intron
ENST00000497898 (GPR126-004) 142438044-142443730 retained_intron
ENST00000508295 (GPR126-007) 142390312-142400776 protein_coding
ENST00000538281 (GPR126-018) 142405309-142408220 retained_intron
ENST00000540208 (GPR126-017) 142402752-142411349 nonsense_mediated_decay
ENST00000541199 (GPR126-006) 142302621-142370451 protein_coding
ENST00000545477 (GPR126-016) 142302626-142381991 processed_transcript
ENSG00000237494 (RP11-753B14.1)
 ENST00000426166 (RP11-753B14.1-001) 142251847-142259632 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030L_0001ENSDARG00000013732ENSDART00000067053ENSDARG00000096675ENSDART00000152841CIL_00030L_0002ENSG00000009844ENST00000367621ENST00000367630ENST00000452973ENST00000491881ENST00000620996ENSG00000112414ENST00000230173ENST00000296932ENST00000367608ENST00000367609ENST00000415128ENST00000435011ENST00000463637ENST00000472054ENST00000497898ENST00000508295ENST00000538281ENST00000540208ENST00000541199ENST00000545477ENSG00000237494ENST00000426166
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030L_0001ENSDARG00000013732ENSDART00000067053ENSDARG00000096675ENSDART00000152841CIL_00030L_0002ENSG00000009844ENST00000367621ENST00000367630ENST00000452973ENST00000620996ENSG00000112414ENST00000230173ENST00000296932ENST00000367608ENST00000367609ENST00000415128ENST00000472054ENST00000545477ENSG00000237494ENST00000426166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013732 ENSDART00000067053 N/A N/A N/A 11.608±1.93 N/A N/A 11.002±5.67 11.628±4.54 0.658±0.00 N/A 10.259±0.00 N/A N/A N/A
ENSDARG00000096675 ENSDART00000152841 N/A N/A N/A 9.644±0.00 N/A N/A N/A N/A 0.511±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009844 ENST00000367621 3.756±0.00 4.594±0.00 1.075±0.00 4.397±0.76 2.813±1.34 4.312±2.09 4.267±2.46 4.790±3.31 3.800±0.76 3.191±0.70 5.447±3.21 9.582±1.90 7.890±1.31 3.904±1.95
ENST00000367630 N/A N/A N/A 0.546±0.11 0.307±0.00 0.362±0.00 N/A 0.327±0.00 N/A N/A 0.524±0.25 N/A N/A N/A
ENST00000452973 N/A N/A N/A N/A 1.000±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620996 3.593±0.00 N/A 1.498±0.00 3.539±2.46 2.030±0.85 2.292±0.79 2.253±1.30 4.112±1.77 2.200±1.19 2.592±0.04 2.909±1.88 7.648±2.66 4.302±0.47 3.550±1.38
ENSG00000112414 ENST00000230173 N/A N/A 0.582±0.00 N/A 0.235±0.00 N/A N/A N/A 3.793±0.00 2.024±0.00 N/A 1.684±1.35 N/A 0.460±0.00
ENST00000296932 0.525±0.00 0.307±0.00 0.874±0.00 0.070±0.00 0.102±0.00 1.592±0.60 0.429±0.00 10.382±9.36 5.592±0.00 4.319±0.00 0.014±0.00 1.713±1.71 2.457±0.94 0.460±0.00
ENST00000367608 0.353±0.00 N/A N/A N/A N/A 1.178±0.00 0.365±0.00 N/A N/A N/A 0.010±0.00 4.846±0.00 0.996±0.00 0.278±0.00
ENST00000367609 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.533±0.00 N/A 2.539±0.00 1.626±0.69 N/A
ENST00000415128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A
ENST00000435011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472054 N/A N/A 1.713±0.00 N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A N/A N/A
ENST00000497898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545477 N/A N/A N/A 0.487±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237494 ENST00000426166 N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A 0.158±0.00 N/A N/A N/A N/A 0.081±0.00

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