C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00030O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054150-ENSDARG00000013732 CGP 7955 20:37318720-37401268
GeneTranscriptPositionBiotype
ENSDARG00000013732 (vta1)
Vps20-associated 1 homolog (S. cerevisiae)
ENSDART00000067053 (vta1-001) 37325307-37401268 protein_coding
ENSDARG00000096675 (si:ch211-202p1.4)
si:ch211-202p1.4
ENSDART00000152841 (si:ch211-202p1.4-001) 37400522-37454024 antisense
CIL_00030O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000203733-ENSG00000009844 CGP 9606 6:142133090-142224689
GeneTranscriptPositionBiotype
ENSG00000009844 (VTA1)
vesicle (multivesicular body) trafficking 1
ENST00000367621 (VTA1-002) 142147257-142219067 protein_coding
ENST00000367630 (VTA1-001) 142147230-142224689 protein_coding
ENST00000452973 (VTA1-201) 142147162-142220946 protein_coding
ENST00000491881 (VTA1-003) 142170346-142198781 processed_transcript
ENST00000620996 (VTA1-202) 142147162-142220946 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030O_0001ENSDARG00000013732ENSDART00000067053ENSDARG00000096675ENSDART00000152841CIL_00030O_0002ENSG00000009844ENST00000367621ENST00000367630ENST00000452973ENST00000491881ENST00000620996
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030O_0001ENSDARG00000013732ENSDART00000067053ENSDARG00000096675ENSDART00000152841CIL_00030O_0002ENSG00000009844ENST00000367621ENST00000367630ENST00000452973ENST00000620996
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013732 ENSDART00000067053 N/A N/A N/A 11.608±1.93 N/A N/A 11.002±5.67 11.628±4.54 0.658±0.00 N/A 10.259±0.00 N/A N/A N/A
ENSDARG00000096675 ENSDART00000152841 N/A N/A N/A 9.644±0.00 N/A N/A N/A N/A 0.511±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009844 ENST00000367621 3.756±0.00 4.594±0.00 1.075±0.00 4.397±0.76 2.813±1.34 4.312±2.09 4.267±2.46 4.790±3.31 3.800±0.76 3.191±0.70 5.447±3.21 9.582±1.90 7.890±1.31 3.904±1.95
ENST00000367630 N/A N/A N/A 0.546±0.11 0.307±0.00 0.362±0.00 N/A 0.327±0.00 N/A N/A 0.524±0.25 N/A N/A N/A
ENST00000452973 N/A N/A N/A N/A 1.000±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620996 3.593±0.00 N/A 1.498±0.00 3.539±2.46 2.030±0.85 2.292±0.79 2.253±1.30 4.112±1.77 2.200±1.19 2.592±0.04 2.909±1.88 7.648±2.66 4.302±0.47 3.550±1.38

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