C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 5B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000289371 EIF5B-001 ENSG00000158417 9606 + 2:99337353-99401326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungMuscleOvaryPlacentaENST00000289371
Transcript ID Brain Breast Kidney Liver Lung Muscle Ovary Placenta
ENST00000289371 0.668±0.00 1.348±0.00 1.006±0.00 1.276±0.00 1.634±0.00 0.805±0.00 7.559±6.11 9.980±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000349 CIL_000349_0001 CGP 2:99284238-99340702
CIL_000348 CIL_000348_0001 CGP 2:99318982-99401326
CIL_000347 CIL_000347_0001 CGP 2:99337353-99490035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003743 NAS translation initiation factor activity
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005829 TAS cytosol
GO:0006184 IEA GTP catabolic process
GO:0006412 TAS translation
GO:0006413 TAS translational initiation
GO:0006446 NAS regulation of translational initiation
GO:0010467 TAS gene expression
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027252 Eif5b-201 protein_coding Mus_musculus 0 4492
ENSMUST00000027251 Rev1-201 protein_coding Mus_musculus 0 521

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