C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00034X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022660-ENSDARG00000042904 CGP 7955 20:32267091-32371617
GeneTranscriptPositionBiotype
ENSDARG00000042904 (foxo3b)
forkhead box O3b 		ENSDART00000062982 (foxo3b-001) 32325646-32371617 protein_coding
ENSDART00000125597 (foxo3b-201) 32329971-32370206 protein_coding
ENSDART00000126370 (foxo3b-202) 32323909-32370053 protein_coding
ENSDARG00000096677 (si:dkeyp-34a4.1)
si:dkeyp-34a4.1 		ENSDART00000152875 (si:dkeyp-34a4.1-001) 32309788-32441241 antisense

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00034X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071324-ENSMUSG00000048756 CGP 10090 10:41914990-42276755
GeneTranscriptPositionBiotype
ENSMUSG00000048756 (Foxo3)
forkhead box O3 		ENSMUST00000056974 (Foxo3-002) 42185786-42276742 protein_coding
ENSMUST00000105501 (Foxo3-003) 42247431-42276755 protein_coding
ENSMUST00000105502 (Foxo3-001) 42181841-42276752 protein_coding
ENSMUST00000175881 (Foxo3-004) 42196268-42276696 protein_coding
ENSMUST00000177542 (Foxo3-005) 42197554-42258366 protein_coding
ENSMUSG00000071324 (Armc2)
armadillo repeat containing 2 		ENSMUST00000095729 (Armc2-201) 41915000-42018382 protein_coding
ENSMUST00000105503 (Armc2-006) 41914993-41976744 retained_intron
ENSMUST00000160262 (Armc2-001) 41914990-42018436 protein_coding
ENSMUST00000160367 (Armc2-007) 41916051-41976122 retained_intron
ENSMUST00000161081 (Armc2-003) 42000349-42018382 protein_coding
ENSMUST00000161167 (Armc2-005) 41986614-41993166 protein_coding
ENSMUST00000161927 (Armc2-002) 41916807-42018442 nonsense_mediated_decay
ENSMUST00000162405 (Armc2-004) 41999808-42018380 protein_coding
ENSMUSG00000085666 (Gm9855)
predicted pseudogene 9855 		ENSMUST00000121229 (Gm9855-001) 42054113-42055306 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034X_0001ENSDARG00000042904ENSDART00000062982ENSDART00000125597ENSDART00000126370ENSDARG00000096677ENSDART00000152875CIL_00034X_0002ENSMUSG00000048756ENSMUST00000056974ENSMUST00000105501ENSMUST00000105502ENSMUST00000175881ENSMUST00000177542ENSMUSG00000071324ENSMUST00000095729ENSMUST00000105503ENSMUST00000160262ENSMUST00000160367ENSMUST00000161081ENSMUST00000161167ENSMUST00000161927ENSMUST00000162405ENSMUSG00000085666ENSMUST00000121229
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034X_0001ENSDARG00000042904ENSDART00000062982ENSDART00000126370ENSDARG00000096677ENSDART00000152875CIL_00034X_0002ENSMUSG00000048756ENSMUST00000056974ENSMUST00000105502ENSMUST00000175881ENSMUSG00000071324ENSMUST00000095729ENSMUST00000105503ENSMUST00000160262ENSMUST00000160367ENSMUST00000161081ENSMUST00000161167ENSMUST00000161927ENSMUST00000162405ENSMUSG00000085666ENSMUST00000121229
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042904 ENSDART00000062982 N/A N/A N/A 5.788±1.43 N/A N/A 22.271±0.00 1.785±0.00 1.448±0.00 N/A N/A N/A N/A N/A
ENSDART00000125597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000126370 N/A N/A N/A 25.659±10.25 N/A N/A 10.884±1.65 N/A 1.186±0.00 N/A 17.301±0.00 N/A N/A N/A
ENSDARG00000096677 ENSDART00000152875 N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048756 ENSMUST00000056974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.291±0.59
ENSMUST00000105501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105502 9.198±3.94 13.244±0.82 6.676±0.78 4.042±0.46 8.831±3.13 24.677±0.93 5.462±0.67 6.960±1.59 6.651±2.84 18.854±3.37 2.550±0.51 14.622±4.27 3.184±1.90 1.295±0.00
ENSMUST00000175881 N/A 9.623±3.02 N/A N/A 8.351±1.34 N/A N/A 4.615±0.00 2.916±0.05 N/A N/A 11.926±5.40 N/A N/A
ENSMUST00000177542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000071324 ENSMUST00000095729 0.053±0.01 0.149±0.00 0.114±0.00 0.635±0.34 0.044±0.00 0.064±0.01 N/A 0.054±0.04 0.027±0.00 0.265±0.12 N/A 0.310±0.14 0.035±0.00 3.635±0.76
ENSMUST00000105503 0.047±0.01 0.123±0.00 0.077±0.01 0.235±0.09 0.057±0.02 0.037±0.00 N/A 0.035±0.00 0.012±0.00 0.184±0.06 0.029±0.00 0.208±0.09 0.038±0.02 N/A
ENSMUST00000160262 0.038±0.02 N/A N/A N/A 0.069±0.02 N/A N/A 0.068±0.03 0.012±0.00 N/A 0.027±0.02 0.298±0.20 0.028±0.01 N/A
ENSMUST00000160367 N/A 0.275±0.15 N/A N/A 0.044±0.01 0.057±0.00 N/A 0.036±0.00 0.017±0.00 0.156±0.00 0.011±0.00 0.388±0.12 N/A N/A
ENSMUST00000161081 N/A 0.788±0.00 N/A N/A 0.529±0.12 0.367±0.12 N/A 0.088±0.00 N/A N/A 0.084±0.00 1.508±0.00 N/A N/A
ENSMUST00000161167 0.328±0.01 0.696±0.00 N/A N/A 0.176±0.00 0.170±0.00 N/A 0.135±0.06 N/A N/A 0.191±0.09 N/A 0.185±0.06 N/A
ENSMUST00000161927 0.056±0.02 0.086±0.02 0.139±0.00 N/A 0.090±0.03 0.106±0.02 N/A 0.033±0.00 N/A 0.257±0.00 0.015±0.01 0.366±0.10 0.063±0.05 5.362±1.37
ENSMUST00000162405 0.139±0.00 0.300±0.05 0.310±0.00 N/A N/A 0.378±0.08 N/A 0.162±0.07 0.030±0.00 N/A N/A N/A 0.097±0.02 N/A
ENSMUSG00000085666 ENSMUST00000121229 0.041±0.00 0.154±0.05 0.143±0.11 3.595±4.00 N/A 0.081±0.00 0.051±0.02 0.050±0.02 0.263±0.26 0.050±0.00 N/A 0.033±0.00 3.582±4.51 0.983±0.95

Loading