C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00035V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125869-ENSG00000101349 CGP 9606 20:9514358-9839041
GeneTranscriptPositionBiotype
ENSG00000101349 (PAK7)
p21 protein (Cdc42/Rac)-activated kinase 7
ENST00000353224 (PAK7-002) 9537389-9838867 protein_coding
ENST00000378423 (PAK7-003) 9537389-9838831 protein_coding
ENST00000378429 (PAK7-001) 9537389-9839041 protein_coding
ENSG00000125869 (LAMP5)
lysosomal-associated membrane protein family, member 5
ENST00000246070 (LAMP5-001) 9514361-9530524 protein_coding
ENST00000427562 (LAMP5-002) 9514358-9529923 protein_coding
ENSG00000225988 (LAMP5-AS1)
LAMP5 antisense RNA 1
ENST00000443469 (LAMP5-AS1-001) 9505180-9514998 antisense
ENSG00000232738 (RP5-986I17.2)
ENST00000428769 (RP5-986I17.2-001) 9575608-9577689 antisense
CIL_00035V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027270-ENSMUSG00000039913 CGP 10090 2:136052239-136387967
GeneTranscriptPositionBiotype
ENSMUSG00000027270 (Lamp5)
lysosomal-associated membrane protein family, member 5
ENSMUST00000057503 (Lamp5-001) 136057927-136069917 protein_coding
ENSMUST00000123436 (Lamp5-003) 136059431-136069905 processed_transcript
ENSMUST00000143777 (Lamp5-002) 136058252-136061494 retained_intron
ENSMUST00000144403 (Lamp5-005) 136052239-136059531 protein_coding
ENSMUST00000154674 (Lamp5-004) 136058252-136059213 processed_transcript
ENSMUSG00000039913 (Pak7)
p21 protein (Cdc42/Rac)-activated kinase 7
ENSMUST00000035264 (Pak7-001) 136081104-136387938 protein_coding
ENSMUST00000077200 (Pak7-002) 136081897-136387960 protein_coding
ENSMUST00000143329 (Pak7-003) 136267695-136387967 retained_intron
ENSMUSG00000085383 (Gm14218)
predicted gene 14218
ENSMUST00000137802 (Gm14218-001) 136137006-136140161 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035V_0001ENSG00000101349ENST00000353224ENST00000378423ENST00000378429ENSG00000125869ENST00000246070ENST00000427562ENSG00000225988ENST00000443469ENSG00000232738ENST00000428769CIL_00035V_0002ENSMUSG00000027270ENSMUST00000057503ENSMUST00000123436ENSMUST00000143777ENSMUST00000144403ENSMUST00000154674ENSMUSG00000039913ENSMUST00000035264ENSMUST00000077200ENSMUST00000143329ENSMUSG00000085383ENSMUST00000137802
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035V_0001ENSG00000101349ENST00000353224ENST00000378423ENST00000378429ENSG00000125869ENST00000246070ENST00000427562ENSG00000225988ENST00000443469ENSG00000232738ENST00000428769CIL_00035V_0002ENSMUSG00000027270ENSMUST00000057503ENSMUST00000123436ENSMUST00000143777ENSMUST00000144403ENSMUST00000154674ENSMUSG00000039913ENSMUST00000035264ENSMUST00000077200ENSMUST00000143329ENSMUSG00000085383ENSMUST00000137802
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101349 ENST00000353224 N/A N/A 0.103±0.00 2.931±0.44 0.201±0.00 0.015±0.01 N/A 0.066±0.06 0.018±0.00 0.040±0.01 N/A 0.044±0.05 0.068±0.06 0.134±0.00
ENST00000378423 N/A N/A N/A N/A N/A N/A 0.005±0.00 0.011±0.00 N/A N/A N/A 0.001±0.00 N/A 0.165±0.00
ENST00000378429 N/A N/A N/A 0.967±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125869 ENST00000246070 N/A 0.520±0.00 0.143±0.00 20.769±4.07 0.521±0.24 0.826±0.00 0.048±0.00 N/A 0.527±0.00 0.616±0.00 N/A 9.647±10.83 0.547±0.51 0.875±0.64
ENST00000427562 0.070±0.00 N/A 0.125±0.00 N/A N/A 0.166±0.00 N/A N/A N/A 0.339±0.00 N/A N/A 0.055±0.00 N/A
ENSG00000225988 ENST00000443469 N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.00 N/A N/A N/A N/A 0.055±0.00
ENSG00000232738 ENST00000428769 N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027270 ENSMUST00000057503 0.065±0.00 N/A N/A 11.866±7.36 N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A
ENSMUST00000123436 0.040±0.01 N/A 0.006±0.00 15.820±9.88 0.109±0.04 0.039±0.00 0.030±0.01 N/A 0.015±0.01 0.025±0.00 N/A 0.079±0.00 0.056±0.02 0.394±0.12
ENSMUST00000143777 N/A N/A N/A 2.426±1.14 N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.025±0.00
ENSMUST00000144403 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A
ENSMUST00000154674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A
ENSMUSG00000039913 ENSMUST00000035264 N/A N/A 0.006±0.00 2.852±1.35 N/A N/A N/A N/A 0.011±0.01 0.038±0.00 N/A N/A 0.006±0.00 N/A
ENSMUST00000077200 0.059±0.00 0.023±0.00 0.019±0.00 4.507±1.96 N/A 0.032±0.01 0.060±0.02 0.019±0.00 0.009±0.01 0.012±0.00 0.008±0.00 0.205±0.12 0.013±0.00 0.120±0.02
ENSMUST00000143329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A
ENSMUSG00000085383 ENSMUST00000137802 N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.423±0.26

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