C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000388_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164379-ENSG00000137273 CGP 9606 6:1312473-1395597
GeneTranscriptPositionBiotype
ENSG00000137273 (FOXF2)
forkhead box F2 		ENST00000259806 (FOXF2-001) 1389834-1395597 protein_coding
ENSG00000164379 (FOXQ1)
forkhead box Q1 		ENST00000296839 (FOXQ1-001) 1312473-1314187 protein_coding
ENSG00000261730 (RP4-668J24.2)
 ENST00000568244 (RP4-668J24.2-001) 1383790-1385066 antisense
CIL_000388_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038415-ENSMUSG00000038402 CGP 10090 13:31558324-31631403
GeneTranscriptPositionBiotype
ENSMUSG00000038402 (Foxf2)
forkhead box F2 		ENSMUST00000042054 (Foxf2-001) 31625816-31631403 protein_coding
ENSMUSG00000038408 (1700018A04Rik)
RIKEN cDNA 1700018A04 gene 		ENSMUST00000126138 (1700018A04Rik-002) 31567397-31582513 lincRNA
ENSMUST00000140980 (1700018A04Rik-003) 31578287-31582513 lincRNA
ENSMUST00000150418 (1700018A04Rik-001) 31565492-31582505 lincRNA
ENSMUSG00000038415 (Foxq1)
forkhead box Q1 		ENSMUST00000042118 (Foxq1-001) 31558324-31560976 protein_coding
ENSMUSG00000087220 (Gm11377)
predicted gene 11377 		ENSMUST00000131539 (Gm11377-001) 31564749-31573562 lincRNA
ENSMUSG00000087276 (Gm11378)
predicted gene 11378 		ENSMUST00000130966 (Gm11378-001) 31619168-31620369 lincRNA
ENSMUSG00000090863 (A530084C06Rik)
RIKEN cDNA A530084C06 gene 		ENSMUST00000170573 (A530084C06Rik-201) 31556134-31559333 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000388_0001ENSG00000137273ENST00000259806ENSG00000164379ENST00000296839ENSG00000261730ENST00000568244CIL_000388_0002ENSMUSG00000038402ENSMUST00000042054ENSMUSG00000038408ENSMUST00000126138ENSMUST00000140980ENSMUST00000150418ENSMUSG00000038415ENSMUST00000042118ENSMUSG00000087220ENSMUST00000131539ENSMUSG00000087276ENSMUST00000130966ENSMUSG00000090863ENSMUST00000170573
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000388_0001ENSG00000137273ENST00000259806ENSG00000164379ENST00000296839ENSG00000261730ENST00000568244CIL_000388_0002ENSMUSG00000038402ENSMUST00000042054ENSMUSG00000038408ENSMUST00000126138ENSMUST00000140980ENSMUST00000150418ENSMUSG00000038415ENSMUST00000042118ENSMUSG00000087220ENSMUST00000131539ENSMUSG00000087276ENSMUST00000130966ENSMUSG00000090863ENSMUST00000170573
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137273 ENST00000259806 0.915±0.00 0.652±0.00 N/A 0.999±0.53 0.824±0.05 17.036±16.23 0.164±0.00 0.370±0.00 1.135±0.00 5.383±5.10 0.325±0.00 0.978±0.44 5.592±3.11 1.310±0.93
ENSG00000164379 ENST00000296839 0.074±0.00 0.025±0.00 0.390±0.00 0.401±0.29 0.216±0.08 0.574±0.00 0.132±0.00 8.736±0.00 0.442±0.00 4.662±0.00 N/A 9.490±10.02 1.060±0.40 0.384±0.18
ENSG00000261730 ENST00000568244 N/A 0.031±0.00 N/A 0.164±0.00 N/A 0.283±0.00 N/A N/A N/A 0.176±0.07 N/A 0.132±0.00 0.060±0.00 0.109±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038402 ENSMUST00000042054 0.063±0.03 0.013±0.00 7.357±0.99 2.109±1.35 0.127±0.05 13.804±0.85 0.063±0.04 0.024±0.02 0.038±0.05 21.278±2.15 0.037±0.01 0.268±0.12 0.772±0.50 0.068±0.04
ENSMUSG00000038408 ENSMUST00000126138 N/A N/A N/A 0.420±0.00 N/A 0.371±0.20 0.069±0.00 0.077±0.01 0.012±0.00 0.535±0.00 N/A 0.358±0.00 0.048±0.00 19.750±7.34
ENSMUST00000140980 N/A N/A 0.307±0.04 0.101±0.06 N/A 0.090±0.02 N/A 0.035±0.01 0.013±0.01 N/A N/A 0.253±0.14 0.026±0.00 0.577±0.00
ENSMUST00000150418 N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A 0.352±0.10 N/A 9.283±7.56
ENSMUSG00000038415 ENSMUST00000042118 0.855±0.83 0.256±0.06 119.033±74.61 2.165±2.13 0.739±0.38 9.955±0.73 0.097±0.06 18.947±6.05 5.901±5.75 5.900±0.38 0.049±0.02 3.664±1.73 3.980±2.92 2.729±0.99
ENSMUSG00000087220 ENSMUST00000131539 0.068±0.00 N/A 0.283±0.00 N/A N/A 0.370±0.18 N/A 0.149±0.07 N/A 1.295±0.00 N/A 1.220±0.66 0.082±0.00 1.236±0.44
ENSMUSG00000087276 ENSMUST00000130966 N/A N/A N/A 0.957±0.76 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090863 ENSMUST00000170573 N/A N/A N/A 0.063±0.00 N/A N/A 0.012±0.00 N/A N/A N/A 0.025±0.00 0.104±0.03 N/A N/A

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