C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00039G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077946-ENSDARG00000008494 CGP 7955 6:39767338-39824390
GeneTranscriptPositionBiotype
ENSDARG00000008494 (myl6)
myosin, light chain 6, alkali, smooth muscle and non-muscle 		ENSDART00000077662 (myl6-001) 39805047-39824390 protein_coding
ENSDART00000130613 (myl6-002) 39812745-39824390 protein_coding
ENSDART00000135631 (myl6-005) 39805041-39824371 protein_coding
ENSDART00000137333 (myl6-006) 39805050-39818550 retained_intron
ENSDART00000138100 (myl6-003) 39805060-39824390 processed_transcript
ENSDART00000141611 (myl6-004) 39805185-39824365 protein_coding
ENSDARG00000077946 (smarcc2)
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 		ENSDART00000112637 (smarcc2-001) 39767338-39797534 protein_coding
CIL_00039G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025369-ENSMUSG00000090841 CGP 10090 10:128459236-128493875
GeneTranscriptPositionBiotype
ENSMUSG00000025369 (Smarcc2)
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 		ENSMUST00000026433 (Smarcc2-201) 128459236-128490173 protein_coding
ENSMUST00000099131 (Smarcc2-202) 128459236-128490173 protein_coding
ENSMUST00000105235 (Smarcc2-203) 128459236-128490173 protein_coding
ENSMUSG00000090841 (Myl6)
myosin, light polypeptide 6, alkali, smooth muscle and non-muscle 		ENSMUST00000164181 (Myl6-201) 128490860-128493875 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039G_0001ENSDARG00000008494ENSDART00000077662ENSDART00000130613ENSDART00000135631ENSDART00000137333ENSDART00000138100ENSDART00000141611ENSDARG00000077946ENSDART00000112637CIL_00039G_0002ENSMUSG00000025369ENSMUST00000026433ENSMUST00000099131ENSMUST00000105235ENSMUSG00000090841ENSMUST00000164181
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039G_0001ENSDARG00000008494ENSDART00000077662ENSDART00000130613ENSDART00000135631ENSDART00000138100ENSDARG00000077946ENSDART00000112637CIL_00039G_0002ENSMUSG00000025369ENSMUST00000026433ENSMUST00000099131ENSMUST00000105235ENSMUSG00000090841ENSMUST00000164181
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008494 ENSDART00000077662 N/A N/A N/A 12.727±0.00 N/A N/A 51.379±33.37 8.058±0.00 0.768±0.00 N/A 6.668±0.00 N/A N/A N/A
ENSDART00000130613 N/A N/A N/A 4.411±0.48 N/A N/A 1.208±0.00 0.379±0.00 N/A N/A 1.076±0.00 N/A N/A N/A
ENSDART00000135631 N/A N/A N/A 94.039±29.70 N/A N/A 27.093±3.09 19.480±0.00 0.817±0.00 N/A 5.714±0.00 N/A N/A N/A
ENSDART00000137333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138100 N/A N/A N/A 111.466±7.64 N/A N/A 29.555±1.22 6.886±0.44 N/A N/A N/A N/A N/A N/A
ENSDART00000141611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000077946 ENSDART00000112637 N/A N/A N/A 24.537±3.84 N/A N/A 1.747±0.63 0.995±0.45 0.061±0.00 N/A 1.027±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025369 ENSMUST00000026433 25.253±6.56 19.068±4.54 11.952±0.26 17.990±4.59 18.679±4.33 N/A 9.197±1.17 4.334±0.00 N/A 15.391±3.80 3.940±1.14 20.815±15.28 12.581±9.69 18.819±0.00
ENSMUST00000099131 N/A 6.243±0.00 4.271±0.23 77.475±17.09 4.125±0.89 3.885±0.00 3.936±0.53 N/A N/A N/A 5.403±1.51 7.224±0.09 N/A N/A
ENSMUST00000105235 14.273±3.00 30.189±4.27 18.392±1.42 48.804±14.99 24.010±11.11 30.792±3.12 3.846±0.94 26.687±1.24 19.783±2.96 21.189±2.78 2.458±0.61 30.732±10.61 12.678±4.39 36.169±14.70
ENSMUSG00000090841 ENSMUST00000164181 536.424±30.79 116.542±71.60 3241.400±486.93 341.430±105.28 227.554±35.82 707.239±68.33 117.917±30.76 538.967±129.10 388.102±172.73 381.790±56.97 45.553±5.60 445.778±277.40 666.260±291.07 94.158±31.16

Loading